Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2029 ATGATGAACATAATAAAGGCAATGAGCAAGTTGATACAAACTCCTTTTATTACGCTTTGTCTTTTTTTTGTGTGTCTGTCACAATGTTCCATTGCATATTCATTAGGTTCTACTAATTCAAAATCATTGCATCATTGCAATTTCCCGGCCATATTCAACTTTGGCGACTCAAACTCCGACACCGGAGGCCTTTCAGCTGCATTTGGACAAGCTGGGCCTCCCAGTGGCATGACCTACTTCCATCACCCGGCCGGTCGCTATTCCGACGGCCGGCTCATCGTGGATTTCATAGCAAAGAAGGTAGGGGTGGAATATTTGAGTGCATACCTAGATTCAGTTGGGTCAAATTTCAGCCGTGGAGCAAACTTTGCAACAGCAGGATCCACAATTAGACCTCAGAACACAACTCTTCGTCAGGCTGGTGGTTTCAGCCCTTTCTCCTTGGATGTTCAGTTCACTCAGTTCAATGATTTTCATCGCAGGTCACAACTCTTTCGCAATAAAGGTGGAGTATACGAAACAATGTTACCAAGAGCAGAGTATTTTTCTCAGGCACTATACACATTTGATATTGGTCAGAATGACTTGGCTGCTGGTTACTTCCACAACATGACCATTGATCAAGTTAGAGCATATGTTCCTGATGTCTTGGCTCAATTCAAGACCATTGTCAAGTGTGTATATGGTCAAGGAGGAAGATCATTCTGGATTCACAACACAGGTCCCGTTGGTTGTTTGCCATACATTATGGATCTTCCTCATGCAAGAGATGCTCCATTGGACAAAGCAGGTTGCAAAATCCCTTACAATGAAGTGGCTAAGTTCTTCAACCGTGGCTTAAAAGAAACTGTGTCTCAACTCAGAAAAGAACTTCACTCTGCTGCCATAACCTATGTTGATGTTTACTCGGTCAAATACCACCTCATTAGTCAAGCAACCAAACATGGTTTTGAGGAGCCACTGAGAGCCTGCTGTGGGCATGGTGGGAAATACAACTACAATTTGCATGTTGGATGTGGAGGGAAGGTGAAGATCAAGGGCAAAGAGGTCATGATTGCGAAACCATGCAAGAATCCAGCGGTTAGGATTAGTTGGGATGGTGTTCACTACACTGAGGCTGCTAACAAGTGGATCTTTGATAAGATTGTAGATGGTTCCTTTTCTGATCCACCTATTCCTTTGAACATGGCTTGTCACAAGAACTTGTAA 1209 0.4351 MMNIIKAMSKLIQTPFITLCLFFVCLSQCSIAYSLGSTNSKSLHHCNFPAIFNFGDSNSDTGGLSAAFGQAGPPSGMTYFHHPAGRYSDGRLIVDFIAKKVGVEYLSAYLDSVGSNFSRGANFATAGSTIRPQNTTLRQAGGFSPFSLDVQFTQFNDFHRRSQLFRNKGGVYETMLPRAEYFSQALYTFDIGQNDLAAGYFHNMTIDQVRAYVPDVLAQFKTIVKCVYGQGGRSFWIHNTGPVGCLPYIMDLPHARDAPLDKAGCKIPYNEVAKFFNRGLKETVSQLRKELHSAAITYVDVYSVKYHLISQATKHGFEEPLRACCGHGGKYNYNLHVGCGGKVKIKGKEVMIAKPCKNPAVRISWDGVHYTEAANKWIFDKIVDGSFSDPPIPLNMACHKNL* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2029 402 Gene3D SGNH hydrolase 37 386 IPR036514 -
Amo06g2029 402 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 46 400 - -
Amo06g2029 402 SUPERFAMILY SGNH hydrolase 51 383 - -
Amo06g2029 402 Pfam GDSL-like Lipase/Acylhydrolase 51 382 IPR001087 GO:0016788
Amo06g2029 402 CDD SGNH_plant_lipase_like 49 386 IPR035669 -
Amo06g2029 402 PANTHER BNAA06G32900D PROTEIN 46 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2029 Amo-Chr6 73764690 73769543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2029 49 396 Acyl Lipid Metabolism Gene Families AT4G10950 26.944 3.07e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2029 - - gmx:100819985 614.764