Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1908 ATGAACCTGTTGTCAAGCTTCTTTAGACACCAAAACTCTCACCCTTTCACCCCTTTCGTCTTTCTCCAAAGAAGATGGAAGAAACCAACGATCTCTGCACAAACCCGTTTAGAAGACAGGGTTCGAGACACTCACCTCGATAACCTTGTATCCTGCATGTCCAAGCTCAGACTCATCCTTGGAATCCACACCTTCATGTCTTCCCGGAAGCGTGGAACCTTCGTTTCCCTGCAGCTCATGTCCCGCTGGAGGAACATCCTCGGACTCAACATCCCTATTGGCTCCTTCCTCCGCAAGTACCCACACATTTTCGAGGTGTTCCTTCACCCCGTAAGGAAGAACCCGTGTTGCAGGGTCACAAGGAAGATGAAGGAGCTGGTCCTAATGGAACGTGTTGTTGTGAGGAAAAATGAGTTGGAGGTTGTGAAGAGGGTGAAGAAGCTTCTTATGATGTCAGTGAATGGCACACTTCGTGTTCATGCTTTGAGGATGATTAAAAGGGAACTTAGTTTGCCTGATGATTTCCGAGACTCAATTTTGGGAAAGCATAGTGATGACTTCAGGTTGGTTGGCTTGGAGGTTGTGGAATTGGTTTGTGAAAATGGTGAATTTGGGGTTGTTGCTGAAGTTGAGAAATGGAGGGAAAAAGAATACACTGAAAAATGGTTGAGTGAGTTTGAGACAAAGTTTGCATTCCCAATTAACCTCCCAACAGGTTTCAAGATTGAGAAAGGATTTAGAGAGAGATTGAAGAATTGGCAGAGGCTTCCTTATACTAAGCCTTATGAGAGCAAAGAGGCCATAAGGGTTAGAAACTCGGGCAGTATTGATCGGTATGAGAAGAGAGCTGTTGCTGTTCTTCACGAGCTTTTGAGCATGACTGTCGAGAAGATGGTTCATGTTGATCATTTGGTGCATTTTCGTAGGGATTTCGCAATTGAGGTTAATCTGCGCGAGTTGTTGCTGAAGCACCCTGGGATATTCTACATATCCACAAAGGGGAAAACTCAGACTGTTATTCTTAGGGAGGTATATAGGAAGGGGAGTTTGATTGAGCCTAATCCTGTTTACACTGCTCGGAGGAACATGTTGGAGCTTGTGTTGTTGCGGCATAGGAAGACAAAACAAATGGTAGATTTTGATGAATCGAGTAAAGGGGGTAACAGTGTGGTATGTAAAGCGAATGAAGGAGTTAAAAGAGAAGGAGATTGGGTGATTCCGTTCTTGGAGAGTTGTGAGGAGAAGAGGTCATTTTGA 1257 0.4463 MNLLSSFFRHQNSHPFTPFVFLQRRWKKPTISAQTRLEDRVRDTHLDNLVSCMSKLRLILGIHTFMSSRKRGTFVSLQLMSRWRNILGLNIPIGSFLRKYPHIFEVFLHPVRKNPCCRVTRKMKELVLMERVVVRKNELEVVKRVKKLLMMSVNGTLRVHALRMIKRELSLPDDFRDSILGKHSDDFRLVGLEVVELVCENGEFGVVAEVEKWREKEYTEKWLSEFETKFAFPINLPTGFKIEKGFRERLKNWQRLPYTKPYESKEAIRVRNSGSIDRYEKRAVAVLHELLSMTVEKMVHVDHLVHFRRDFAIEVNLRELLLKHPGIFYISTKGKTQTVILREVYRKGSLIEPNPVYTARRNMLELVLLRHRKTKQMVDFDESSKGGNSVVCKANEGVKREGDWVIPFLESCEEKRSF* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1908 418 Pfam Plant organelle RNA recognition domain 41 371 IPR021099 GO:0003723
Amo06g1908 418 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 10 415 - -
Amo06g1908 418 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 10 415 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1908 Amo-Chr6 69476486 69477742 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1908 - - vun:114194999 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2633 16 116018596 116021880 Amo06g1908 06 69476486 69477742 hybridization