Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1871 ATGGTGAATACTGGATTGCTTTCTGGAAGCAAATCAGTGAAGATTACCTTCCAGTTACCATATTTCACCCATTGGGGTCAGAGTTTGCTGGTGTGTGGTTCTGTGTCGGTGCTCGGTTCGTGGAATGTGAAGAAGGGTGTGCTGCTCACCCCCATTCATCAAGGGGCTGAGCTCATCTGGAGTGGCAGCATCACAGTGCCAAAAGGGTTCCAATGCCAATACCAATATTATGTGAGGCGCGAATTGGCGCTCCCTGAAGGCATACAGAGTGGGCAGGAGATCGAGTTCCGTGATCTTTGGCAGACAGGCTCAGATGGTATCCCTTTTCGAAGTGCTTTTAGAGATGTTATTTTCCGGCAAAGCTGGGATCCGAGCAAAGAGGCAGCTGCCATAGAAGCCAACAATAGTAAATTTGAGCTGGAAGCGGAATCCATAGTCATTCTGTTCAGGATAAACTGCCCAAGCATTGAGAAAGACACATCAATATGTGTGATTGGAAGCCATGAAAAGTTAGGGAAGTGGAAGCCTGAAAATGGATTAAAACTCAGATATTGTGGCAAATCCATATATTGCAAATATGGTGGGGCTGGCAATGTTTCTATAGAGAATGGCCTAAATCGTGAAGTCTCCATTAGCTCCTCAAGGAGTGAGGCAAAATATATATGTCTTTCAGATAGCATGATGCGAGAAACACCTTGGCGTGGTGCTGGTGTGGCGATCCCTATGTTTTCTGTTAGGTCGGAATGTGATCTCGGAGTTGGAGAGTTTCTTGACCTTAAATTACTAGTAGACTGGGCTGTAGCATCCGGATTTCATTTAGTTCAACTTTTACCTATCAATGACACATCAGTTCACAGGATGTGGTGGGATTCTTATCCATACAGTTCACTATCAGTATTTGCATTGCATCCATTGTACCTGCGAGTTCAAGCACTTTCTAAGAACATACCTAAGGAGATCAAGGAAGAGATTGAGAAGGCAAAACAACAATTGGATTTGAAGGATGTTGATTATGAGGCTACAATGGCTGCTAAACTCTCAATTGCCAAGAAAATTTTCGACCTAGAGAAAGATGTGATACTTAACTCGAGTTCCTTTAAGGAGTTTTTTGCAGAGAACGAGGGTTGGTTGAAACCCTATGCTGCCTTCTGTTTCCTGCGGGACTTTTTCGAGACATCAGATCGCACTCAATGGGGTTGTTTTGCTCATTATTCAGAAGATAAGCTTGAGAAACTTGTATCAAAGGAAAGCTTGCATTATGAGATAATTTGCTTCCAATACTATATTCAATACCATCTACACTTACAATTATCTGAAGCTGCAGAATATGCGAGAAAGAGGAGAGTGGTTCTAAAGGGAGATCTTCCTATTGGAGTTGATAGGAACAGTGTTGATACTTGGGTTTATCCAAATCTGTTCCGAATGAATACTTCCACAGGAGCACCTCCAGATTATTTTGATAAGAACGGCCAGAATTGGGGCTTTCCAACTTATAATTGGGAAGAAATGTCAAAAGACAACTATGGCTGGTGGCGAGCTCGCTTGACACAGATGGCAAAATATTTTACAGCTTATAGGATTGACCACATATTGGGATTCTTTCGAATCTGGGAGCTTCCAGATCATGCTGCCACTGGTTTAGTTGGAAAATTCCGACCATCTATTCCTCTAAGTCAGGAGGAACTTGAAAGGGAGGGCATATGGGACTTTAATCGCCTGAGTCGTCCATACATTAGGCAGGGACTCTTGCAGCAAAAATTCGGAGCTGCTTGGGCATTTGTTGCAACAACTTTTCTGAATGAATATGAGAAGAACTGCTATGAGTTCAAGGAGGATTGCAACACAGAGAAAAAAGTTGTTTCCAAGCTAAAAAGTTGTGCTGAAAGTTCCCTCTTGTTAGAGAGTGAAGACAAACTGCGGCGCACCCTCTTTGATCTTTTACAGAATATAGTTCTTATCCAAGATCCAGAGGATCCAAGAAAATTTTATCCTCGTTTCAACCTTGAGGATACTTCAAGCTTCAAGGATCTGGATGATAAAAGCAAGAATGTTCTCAAAAGATTATACTACGACTACTATTTCCATCGTCAAGAGAATCTTTGGAGGGAAAATGCGTTGAAGACCCTACCCGTCCTTCTGAACTCATCAGACATGCTGGCATGTGGAGAAGATTTGGGTCTTATTCCTTCTTGTGTCCATCCTGTTATGCAAGAACTGGGATTGGTTGGGTTGCGGATTCAACGCATGCCCAATGAACCTGGTCTGGAGTTTGGTATTCCTTCCCAGTACAGCTACATGACAGTATGCGCCCCGTCTTGTCACGACTGCTCCACCTTGCGTGCCTGGTGGGAAGAAGATGAAGATAGAAGACTGCGCTATTTCAAGAATGTGGTGGAGTCTGACGAGTTACCACCCGATCGATGCACTCCAGAAGTTGCACATTTTGTTATAAGGCAACATGTTGAAGCCCCATCAATGTTGGCAATTTTCCCTCTCCAGGACTTGCTAGCATTAAAAGAAGAATATACTACACGCCCCGCGACAGAGGAGACAATCAATGACCCCACAAATCCGAAGCATTATTGGAGATACCGTGTACATGCCACGCTGGAATCTTTGAACAAGGATACTGAGCTCAAAACCATCATCAAAGATCTTGTTCGTTGGGGCGGAAGATCTTTCCCCCCGGATGAAACTGAAGTATCGTCATCATCAGCATCAGGATCCAACTCCGACAAGGAGCGGCTTGCCAGTTCCATGGAAAAGATCAGTCTTCCTTCCAAATAG 2787 0.4367 MVNTGLLSGSKSVKITFQLPYFTHWGQSLLVCGSVSVLGSWNVKKGVLLTPIHQGAELIWSGSITVPKGFQCQYQYYVRRELALPEGIQSGQEIEFRDLWQTGSDGIPFRSAFRDVIFRQSWDPSKEAAAIEANNSKFELEAESIVILFRINCPSIEKDTSICVIGSHEKLGKWKPENGLKLRYCGKSIYCKYGGAGNVSIENGLNREVSISSSRSEAKYICLSDSMMRETPWRGAGVAIPMFSVRSECDLGVGEFLDLKLLVDWAVASGFHLVQLLPINDTSVHRMWWDSYPYSSLSVFALHPLYLRVQALSKNIPKEIKEEIEKAKQQLDLKDVDYEATMAAKLSIAKKIFDLEKDVILNSSSFKEFFAENEGWLKPYAAFCFLRDFFETSDRTQWGCFAHYSEDKLEKLVSKESLHYEIICFQYYIQYHLHLQLSEAAEYARKRRVVLKGDLPIGVDRNSVDTWVYPNLFRMNTSTGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLVGKFRPSIPLSQEELEREGIWDFNRLSRPYIRQGLLQQKFGAAWAFVATTFLNEYEKNCYEFKEDCNTEKKVVSKLKSCAESSLLLESEDKLRRTLFDLLQNIVLIQDPEDPRKFYPRFNLEDTSSFKDLDDKSKNVLKRLYYDYYFHRQENLWRENALKTLPVLLNSSDMLACGEDLGLIPSCVHPVMQELGLVGLRIQRMPNEPGLEFGIPSQYSYMTVCAPSCHDCSTLRAWWEEDEDRRLRYFKNVVESDELPPDRCTPEVAHFVIRQHVEAPSMLAIFPLQDLLALKEEYTTRPATEETINDPTNPKHYWRYRVHATLESLNKDTELKTIIKDLVRWGGRSFPPDETEVSSSSASGSNSDKERLASSMEKISLPSK* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1871 928 PANTHER - 10 893 - -
Amo06g1871 928 Gene3D Glycosidases 689 892 - -
Amo06g1871 928 SUPERFAMILY Starch-binding domain-like 143 215 IPR013784 GO:0030246
Amo06g1871 928 Gene3D Immunoglobulins 7 103 IPR013783 -
Amo06g1871 928 Gene3D Immunoglobulins 140 216 IPR013783 -
Amo06g1871 928 MobiDBLite consensus disorder prediction 897 914 - -
Amo06g1871 928 SUPERFAMILY (Trans)glycosidases 233 886 IPR017853 -
Amo06g1871 928 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 7 124 IPR002044 GO:2001070
Amo06g1871 928 SUPERFAMILY Starch-binding domain-like 9 81 IPR013784 GO:0030246
Amo06g1871 928 MobiDBLite consensus disorder prediction 890 928 - -
Amo06g1871 928 Gene3D Glycosidases 233 563 - -
Amo06g1871 928 Pfam Starch binding domain 13 81 IPR002044 GO:2001070
Amo06g1871 928 Pfam Starch binding domain 147 193 IPR002044 GO:2001070
Amo06g1871 928 SMART CBM_20_2 144 221 IPR002044 GO:2001070
Amo06g1871 928 SMART CBM_20_2 12 112 IPR002044 GO:2001070
Amo06g1871 928 Pfam 4-alpha-glucanotransferase 240 868 IPR003385 GO:0004134|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1871 Amo-Chr6 68101502 68109198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1871 13 915 Glycoside Hydrolase AT2G40840 69.947 0.0 1372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1871 K00705 - gmx:100793021 1547.72