Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1870 ATGGCTGTAGCCATTAACCAACACCACGGATTTAAGCCATTCAGCAGGTCCCAGAGATGCAAGCTCCAATCCTTCAGTCACCTTGATCAGACCATTTTGGAACTCAATCGAGCTACTCTTTCCCACCACTCCTTTAAACAAAAACAAAAACTACAACAACAACAACATACTCACCTTCTTGAATCTGAAGAAGCTGACATCATCCATCGCAGCTTCTCCACTCCATGCCTCCCCTTAACCACTTTATCATCCGGGGAAGACCTCCCTTCCTCCTCGCATCCAAGAATCGAGATTGTTCGCGGCACCGGGGCTCCGGTCCACGCTCTGGTAGTCGAGGTCGCAATTGCCATGGCCTCCGGTCTTCACCCGAAACCACTCCCAAACGGTCTTGGCGGTGCCTACCTCTTCTGCAATCCAATCAGCGGCAAAAACATCGCCGTAGCAAAGCCCGTCGACGAAGAGCCCTTAGCCTTAAACAACCCAAAGGACCTGGGCTCTCAATTGCCGGGCCAGCCGGGCCTCAAGACTTCAATTCGCATCGGCGAGGCTGCTACCCGTGAGCTTGCTGCATATCTCCTCGATCACGGCTCCTTCGCTGCTGTACCTCCAACAGCCCTCGTCAAATTCTCTCACGCTTCTTTCTTCGCCAACGACGCGCCTAAACTCGCGTCGCTTCAACGCTTCATCGGTCACGCTTTCGATGCCGGCGAGTTGGGACCTTCTCTCTACTCTGTTTCCTCTGTTCACCAGATCGGAATCTTGGACATTCGCCTTCTCAACCTTGATAGACACGCCGGCAACATGCTTGTTATGAATCATGGCTTCGTTCCTGGTGTTGCTGCTCATCTTGTTCCCATTGACCATGGCTTCTGCCTCCCTGAGTGGCTTGACGATCCTTACTTTGAGTGGCTCCATTGGCCACAGGCTTCTACACCTTTCTCCAACTCAGAACTTGATTACATCTCGAAACTCGATCCATTTAAGGACGCTCAGATTCTAAGATCAGAGCTTCCTCTGTTGAGGGAGTCCTCAATTAGGGTTCTTGTTGTTTGCACCATTTTCTTGAAGCATGCTGCAGCTGCAGGTCTTTGCCTCACCGACATAGGGTTACTGATGACGAGGGAGTTTTGTGGCGGCAAAGAAACACCGAGCGAGTTAGAGACAATTTGCTCACAGGTTAAGGCCAGTGTTCCTCTTGATGTTCCCAACAATAATAACGAAGAAGAAGAAGGGAGTAGTTGCGAGATTAGTGGCATTTCCTTTGGAGACATGAGGAAAGGTGAATGGGAATCTTTTCTGGAGATTTTCGATAAGGTTTTGTGTGGTGTGTTTGGAAACAAGCAAGTTTAA 1350 0.5 MAVAINQHHGFKPFSRSQRCKLQSFSHLDQTILELNRATLSHHSFKQKQKLQQQQHTHLLESEEADIIHRSFSTPCLPLTTLSSGEDLPSSSHPRIEIVRGTGAPVHALVVEVAIAMASGLHPKPLPNGLGGAYLFCNPISGKNIAVAKPVDEEPLALNNPKDLGSQLPGQPGLKTSIRIGEAATRELAAYLLDHGSFAAVPPTALVKFSHASFFANDAPKLASLQRFIGHAFDAGELGPSLYSVSSVHQIGILDIRLLNLDRHAGNMLVMNHGFVPGVAAHLVPIDHGFCLPEWLDDPYFEWLHWPQASTPFSNSELDYISKLDPFKDAQILRSELPLLRESSIRVLVVCTIFLKHAAAAGLCLTDIGLLMTREFCGGKETPSELETICSQVKASVPLDVPNNNNEEEEGSSCEISGISFGDMRKGEWESFLEIFDKVLCGVFGNKQV* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1870 449 Pfam Phosphatidylinositol 3- and 4-kinase 145 366 IPR000403 -
Amo06g1870 449 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 120 405 IPR000403 -
Amo06g1870 449 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 415 447 IPR044571 -
Amo06g1870 449 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 414 IPR044571 -
Amo06g1870 449 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 1 414 - -
Amo06g1870 449 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 415 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1870 Amo-Chr6 68088551 68093038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1870 1 412 Acyl Lipid Metabolism Gene Families AT2G40850 55.035 1.57e-143 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1870 - - aip:107647121 772.311