Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1731 ATGCACTACAATGGATACTACCATCTGTTTTATCAATACAACCCTAAAGGTTCAGTGTGGGGTAACATTGTATGGGCTCACTCAGTCTCAAAAGATCTCATCAATTGGAAAGCACTTGAGCCGGCCATTTATCCATCGAAACCCTTCGACAAGTTCGGGTGTTGGTCAGGTTCAGCCACCATCATCCCCGGAAAAGGGCCGGTGATCCTGTACACCGGAATAGTCGACGCGAACAAAACTCAAGTTCAATGCTATGCCGTCCCAGAAGACTTATCTGACCCTTTCCTCACAAAATGGATCAAACCGGACGAGTATAATCCCATCGTGGTCGCCGGCCCCGGCGTCAATCGCACCGACTTCCGGGACCCAACAACTGCATGGTTCGAAGACGGACACTGGAAGATTTTGGTTGGTAGTAGAAGGAAGCATAGAGGAATTGCATACTTGTATAGGAGTAGGGACTTCAAGAAATGGATTCGAGCCAAACACCCTATTCATACTGCTGCTGGAACGGGTATGTGGGAGTGTCCAGATTTCTACCCGGTTTCTATGAAGGGGACAATGGGATTGGATACGTCTGTGGTTGGTAATCATGTTAAGCATGTGTTGAAGAATAGTCTTGATGAGACTAGGTTTGAGTATTATACTTTAGGTACCTATTTCACCAATATAGATAGGTATATACCGGACAACACCTCTGTTGATGGTTGGGGTGGTCTTAGGTATGATTATGGTAATTTCTATGCATCCAAGTCCTTCTTTGACCCCACTATGAATAGAAGGATCTTGTGGGGTTGGGCTAATGAGTCTGATACTAAGGAAGATGATATCCACAAAGGATGGGCAGGAATTCAGGCAATTCCAAGAACTCTGTGGCTTGATCCTGGCGGTAGACAATTGATACAATGGCCTATTGAGGAATTAAATAGCCTTAGGGATAAAGAAGTAGAGATGAGCAATCTAAAGCTTGTAAAGGGAGATTATGTTGAAGTTAAAGGAATTACTGCTGCTCAGGCAGATGTAGAAGTTACCTTCTCATTTTCAAGCTTGAACGAGGCTGAAGCATTTGATCTAAGCTGGGTCAACGCAGAGGATTTGTGTGGTAAAAAGGGTTCAAATATTCAAGGTGGGGTTGGACCTTTTGGTATTCTAACATTGGCTTCAAAAAATTTGGAGGAGTTTACTCCTGTCTTCTTTAGAATTTTTAAAGCTTCGAACAAGCATGTAGTGCTCTTATGCTCCGATGCAAGAAGTTCTTCTTTGAAGAGTGAGTTGTACAAGCCATCATTTGCTGGATTTGTAGATGTGGATTTGTCTACTACTAAGAAGCTTTCTCTTAGGAGTTTGATTGATCATTCTGTAGTGGAGAGTTTTGGAGCAGGAGGAAAAACAAATATTTTATCTAGAGTTTATCCTGAGTTAGCTGTGGCAGATCAAGCTCACTTATTTGTGTTTAACAATGGAACCGTACCAATCGTTGTGGAAAATCTTAGATCATGGAGCATGAAATCTGCTGTCATAAATTGA 1527 0.4257 MHYNGYYHLFYQYNPKGSVWGNIVWAHSVSKDLINWKALEPAIYPSKPFDKFGCWSGSATIIPGKGPVILYTGIVDANKTQVQCYAVPEDLSDPFLTKWIKPDEYNPIVVAGPGVNRTDFRDPTTAWFEDGHWKILVGSRRKHRGIAYLYRSRDFKKWIRAKHPIHTAAGTGMWECPDFYPVSMKGTMGLDTSVVGNHVKHVLKNSLDETRFEYYTLGTYFTNIDRYIPDNTSVDGWGGLRYDYGNFYASKSFFDPTMNRRILWGWANESDTKEDDIHKGWAGIQAIPRTLWLDPGGRQLIQWPIEELNSLRDKEVEMSNLKLVKGDYVEVKGITAAQADVEVTFSFSSLNEAEAFDLSWVNAEDLCGKKGSNIQGGVGPFGILTLASKNLEEFTPVFFRIFKASNKHVVLLCSDARSSSLKSELYKPSFAGFVDVDLSTTKKLSLRSLIDHSVVESFGAGGKTNILSRVYPELAVADQAHLFVFNNGTVPIVVENLRSWSMKSAVIN* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1731 508 Pfam Glycosyl hydrolases family 32 C terminal 307 500 IPR013189 -
Amo06g1731 508 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 1 507 - -
Amo06g1731 508 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 507 - -
Amo06g1731 508 SUPERFAMILY Arabinanase/levansucrase/invertase 1 305 IPR023296 -
Amo06g1731 508 Gene3D - 317 502 - -
Amo06g1731 508 Gene3D Glycosyl hydrolase domain; family 43 1 316 IPR023296 -
Amo06g1731 508 SMART glyco_32 1 462 IPR001362 GO:0004553|GO:0005975
Amo06g1731 508 SUPERFAMILY Concanavalin A-like lectins/glucanases 304 505 IPR013320 -
Amo06g1731 508 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 304 IPR013148 -
Amo06g1731 508 CDD GH32_Fruct1-like 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1731 Amo-Chr6 59809073 59811729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1731 1 506 Glycoside Hydrolase AT3G52600 65.385 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1731 K01193 - gmx:100777418 873.233