Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1729 ATGTCTCTTCGCCACGAGAAAGAGAAGGGAGTGAACGTGCAGGTCCTCCTCCGCTGCCGCCCCTTCAGCGATGACGAGTTGCGCTCCAACGCCCCCCAGGTTGTCACCTGCAATGACTATAACAGAGAAGTCGCCGTCTCTCAAAACATCGCCGGCAAGCACATTGACAGGGTTTTCACTTTTGACAAGGTTTTTGGTCCTAATGCACGACAACAAGATCTTTACGATCAAGCTATTATTCCTATTGTAAATGAAGTTCTAGAAGGATTTAATTGTACTATATTTGCATATGGTCAAACTGGTACTGGAAAAACATACACTATGGAAGGTGAATGCAAAAGGTCAAAGAGTGGTCCCAATGGAGAGTTGCCTGCAGAGGCTGGAGTCATTCCTAGAGCTGTTAAACAGATTTTTGACACTCTTGAGAGCCAAAATGCTGAGTACAGTGTCAAAGTCACTTTTTTGGAATTGTACAATGAAGAGATCACCGATTTGCTTGCCCCCGAAGAACTTTCGAAAGTTTCTTTGGAAGATAAGCAAAAGAAGCAGCTGCCACTTATGGAGGATGGCAAAGGTGGAGTTCTTGTAAGGGGATTAGAGGAAGAGATTGTGACGAGTGCTAGCGAGATTTTTACCCTTCTGGAGAGAGGGTCTGCCAAAAGACGCACTGCTGAAACTCTGTTGAACAAGCAGTCAAGTCGGTCACATTCATTGTTTTCAATAACAATCCACATCAAAGAGGCAACCCCAGAAGGTGAAGAACTAATCAAATGTGGCAAACTGAATTTAGTGGATCTGGCTGGCTCGGAAAATATATCTCGTTCTGGTGCTAGGGAGGGTCGTGCAAGAGAGGCTGGAGAAATAAACAAGAGCTTGCTTACTTTAGGGCGGGTGATCAATGCACTTGTGGAGCACCTTGGTCACGTTCCTTACAGGGATAGCAAGTTGACACGTTTACTGCGTGATTCCCTTGGGGGAAGAACCAAAACATGCATCATAGCGACAGTATCCCCTGAAGTTCATTGCTTGGAAGAAACTTTGAGCACGCTGGATTATGCACATAGGGCAAAGCACATTAAAAATAAGCCTGAGGTTAATCAGAAGATGATGAAGTCAACTCTTATTAAGGATCTTTATGGGGAAATTGAACGCCTGAAGGCAGGTTCTACACGTGAGAAAAATGGAGTGTATATACCAAAGGAGAGATTTTATCAAGAAGAAAGTGAAAGGAAGGCCATGGCAGATCAGATTGAGCAGATGGGGCTAACTATAGAAAATCATCAGAAGCAATATGATGATTTGAATAGTAGATACATTGAACAAGTTCGACAATGCTCTGATTTGGGCAACAAACTTGATACCACACAGAAAAACTTGAACAAGACCAGTGAGTTGCTCACTAACACAGAGGATGAATTGAGGAGATGCCAGTATACCGTGAAAGAGAAAGACTTCATCATTTCTGAGCAGAGAAAAGCGGAAAATGCTCTAGCTCATCAAGCTTGTGTATTACGGGCTGATTTGGAGAAAGTTCTTCAGGATAATGCTTCACTGTTTTTGAAAATTGGTAGAGAAGACAAGCTGAACTTGGATAACAGGGCTGTGGTGAACAATTTTCAAGCAGAGCTTGCCCAGCAGGTTGGTTGTCTTTGCAATATTGTTGCGACATCATTGTCAGAACAGAGTGAACATCTGACATGTGTGGAGACGCTCTGCCATTCTTTTCTAGGTGTTCATGATAAGGTGGTTTTGGATTTAAAAAATAAAGTGACAGGTTTAAGAAACCTGTACTTATCACACATTGAGGCAGTGCAAAATGTGGTTCGTTTGCATAAGGCGAGCTCAGATGGTGCTTTAGAGGAATTATCTTCTCTGATATCTTCCAATGGTCGTTCTATTCAAGAATTTCTTGAATCTGAGGCCACTCAAGCTGGAGCAATATTTGATGAACTTCAGAGCTCTCTTTCAACTCAGCAGGGTGAACTGGCAGTTTTTGCTAGGGAAATGCGCCATAGATTCAATCTTAGCGTTGAACAAATAAAGGATATATCTGATCGCTCTCAAGAATTTGTTGATAAGCTTTTTGAAGAATCAAAAAAGCTTGAAGACTTTGCATCAGAGGCTGAGCAAACACAACTGAATTGTATTGCTGACTTTAGGAAGTCTTTCGAGGAGCAATCAAGATCAGATTCAGAGAAGCTTATTGCGGATATGACCAGCTTAGTTTCTGATCACATTCGTCGTCAAATGGATCTGGTGGATGAAAAGCTTGTTGATCTTAGACAGAGCAGCATTAAGAACAAGACTTTCTTGGACGAACATGTGTCTTCAGTAGGAGAAATTGTGTCCCATGCAAAAAGGAAATGGCAATCTTTTTGTGTGCAAGCAGAGAAAGAGACCAAGGATACTGCTGATTATTCTGCAGCAAAGCATTGCCGTATGGAGTTACTCATGCAGCAAAGTGTAAGTACCGCTGGATCAGCTTTAGAGCATATGAAGAGGACTCATGAGGCTGTAAATGAGAAAGAGTCCAAGCATATTTCTGCAGCAGTGTCACTAATCAGTAATTCTTCTAATAGCAATGAGCAACATGACATGGAGATCAATTCTGCTCGTGTTGCAGCAGAGGAAGATGTGGCAAAGAACAGCAAGGATCTCTTTGAGCAGTTTGATTTCATGTCTGCGCAAGAGCGGGAATCCATTTCTGGAATGCTGGATGTAGTAAAGACTCATTCAAATACACTTGAGACCTTTAGAGAAGACCATGCTGGCCAAGCCTCTTCGATTGAAGAGAAGGCTCGCGAAACTTTTCAACAGCACTATAGGGACTATGAGCCTAGTGGAAATACACCAGTAAGATGTGAAACAGACGTTCCGAGTAAAGGAACAATCGAGTCTCTTCGATCACTGCCAGTGGAATCGCTTCTTGAGGAGTTTCGGGAAAACAATTCAAGTGAATCCTCAGTAAAGGAGTTGAAACCATCGCTTATTCCACGTTCTCCTCTTAGCGCACTGAACTGA 3021 0.4263 MSLRHEKEKGVNVQVLLRCRPFSDDELRSNAPQVVTCNDYNREVAVSQNIAGKHIDRVFTFDKVFGPNARQQDLYDQAIIPIVNEVLEGFNCTIFAYGQTGTGKTYTMEGECKRSKSGPNGELPAEAGVIPRAVKQIFDTLESQNAEYSVKVTFLELYNEEITDLLAPEELSKVSLEDKQKKQLPLMEDGKGGVLVRGLEEEIVTSASEIFTLLERGSAKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHVPYRDSKLTRLLRDSLGGRTKTCIIATVSPEVHCLEETLSTLDYAHRAKHIKNKPEVNQKMMKSTLIKDLYGEIERLKAGSTREKNGVYIPKERFYQEESERKAMADQIEQMGLTIENHQKQYDDLNSRYIEQVRQCSDLGNKLDTTQKNLNKTSELLTNTEDELRRCQYTVKEKDFIISEQRKAENALAHQACVLRADLEKVLQDNASLFLKIGREDKLNLDNRAVVNNFQAELAQQVGCLCNIVATSLSEQSEHLTCVETLCHSFLGVHDKVVLDLKNKVTGLRNLYLSHIEAVQNVVRLHKASSDGALEELSSLISSNGRSIQEFLESEATQAGAIFDELQSSLSTQQGELAVFAREMRHRFNLSVEQIKDISDRSQEFVDKLFEESKKLEDFASEAEQTQLNCIADFRKSFEEQSRSDSEKLIADMTSLVSDHIRRQMDLVDEKLVDLRQSSIKNKTFLDEHVSSVGEIVSHAKRKWQSFCVQAEKETKDTADYSAAKHCRMELLMQQSVSTAGSALEHMKRTHEAVNEKESKHISAAVSLISNSSNSNEQHDMEINSARVAAEEDVAKNSKDLFEQFDFMSAQERESISGMLDVVKTHSNTLETFREDHAGQASSIEEKARETFQQHYRDYEPSGNTPVRCETDVPSKGTIESLRSLPVESLLEEFRENNSSESSVKELKPSLIPRSPLSALN* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1729 1006 MobiDBLite consensus disorder prediction 979 1006 - -
Amo06g1729 1006 PRINTS Kinesin heavy chain signature 89 110 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g1729 1006 PRINTS Kinesin heavy chain signature 260 278 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g1729 1006 PRINTS Kinesin heavy chain signature 226 243 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g1729 1006 PRINTS Kinesin heavy chain signature 309 330 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g1729 1006 ProSiteProfiles Kinesin motor domain profile. 12 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g1729 1006 SMART kinesin_4 10 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g1729 1006 Coils Coil 417 444 - -
Amo06g1729 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 388 IPR027417 -
Amo06g1729 1006 Gene3D Kinesin motor domain 2 390 IPR036961 -
Amo06g1729 1006 ProSitePatterns Kinesin motor domain signature. 259 270 IPR019821 GO:0003777|GO:0005524|GO:0007018
Amo06g1729 1006 PANTHER 125 KDA KINESIN-RELATED PROTEIN-LIKE 1 1006 - -
Amo06g1729 1006 PANTHER KINESIN-LIKE PROTEIN KIF11 1 1006 - -
Amo06g1729 1006 Coils Coil 452 472 - -
Amo06g1729 1006 Pfam Kinesin motor domain 18 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo06g1729 1006 CDD KISc_BimC_Eg5 10 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1729 Amo-Chr6 59743404 59749496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g1729 12 396 Miscellaneous Gene Families AT5G06670 37.186 3.16e-64 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1729 K10398 - gmx:100800246 1634