Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1629 ATGGCATCAGCATTGATGACGGGGGATGATTTAGCCATGTCAACCAGCGGTCGCCGGAGCTTGACCTCTGCCAGCTTCAGGGACGTTTGGACTGCGGCGGCTGAGCCGGACGTGTTTGGCCGTAGCAACCGCCACATGCAGGAGGACGACGAGCAGCACCTCACTTGGGCTGCCATCGAGAGACTGCCAACATTAGATCGAATGAGAAAAGGTGTGCTCAAGCAAGTTCTTGATAATGGCGAAGTAGTCCATGGCGAAGTTGATGTTACCAAGCTTGGCTTCCATGATCGGAAGATTCTCATGGAAAGCATATTAAAGGTTGTTGAAGAAGACAATGAGAAGTTCTTGCACACGCTTAGAAACAGAGTCGATAGGGTGGGGATTGAAATTCCTAAAATTGAAGTCCGGTATGAGAATTTATCTGCAGAGGGAGATTTGTATGTTGGGAGTAGAGCGCTTCCTACTTTGCTTAATGCCACTCTCCACACTTTTGAGAGCATCTTAGGATTGTTTCACCTTGCACCCTCCAAGAAGAAAGAAATTCAGATTCTTAAAGATTCCTCGGGGAAAATCACTTATTGTGGTCATGAGCTAAATGAATTCGTTGCTGGAAAAACTTGTGCCTATATTAGTCAACATGATATTCACTATGGAGAAATGACAGTGAGAGAGACATTAGATTTCTCAGGACGCTGTTTAGGTGTTGGAACGAGGTACGAGATGCTGGTGGAACTGTCAAGAAGGGAGAAAGATGCAGGAATAAAGCCAAACCCTGAAATTGATGCATTCATGAAGGCCACAGCTATGTCAGGCCAAAAAACCAGTTTGGTAACTGATTATGTTCTCAAGATACTTGGAATGGATATTTGTGCTGACATTATGGTTGGTGATGAAATGAGAAGGGGTATCTCTGGTGGACAGAAAAAGCGCTTAACTACAGGGGAGATGTTGGTTGGACCGGCAAAGGTGCTCTTCATGGATGAAATATCAACAGGGTTGGACAGTTCCACCACTTTTCAGATATGCAAGTTCTTGAGACAGATGGTTCATATCATGGATGTGACCATGGTGATTTCTCTTCTGCAGCCAGCACCAGAGACATTTGATCTCTTTGATGACATTATCCTACTTTCAGAAGGCCAAATTGTATACCAAGGTCCGCGCCAGAGCGTGCTACAGTTCTTTGAACACATGGGATTCAAGTGTCCAGAGAGAAAAGGAGTTGCTGATTTTCTACAAGAAGTAACATCCAAGAAAGACCAGCAACAATATTGGTCTCAAAAAGATGAACCTTATAGATACGTTTCGACTTCGGAATTCGCAGAGGCCTTCAGTTCATTTAAAATAGGTGAACAACTTGTGACTGAGCTTGGGATTCCCTATGATAAGCGTGGAGTCCACCAAGCTGCTTTGGTAAAAGACAAGTATGGCATATCAAACTGGGAACTATTTAAGGCATGCTTCTCAAGAGAATGGTTGCTCATGAAGCGTAGTGCTTTTGTTTATGTATTCAAGACAACACAGATAACAATTATGTCTATCATCACCTTTACTGTGTTCCTTAGAACCCAAATGCCAGTGGGGACTGTCCAAGATGGACAAAAATTCTTTGGAGCACTATTTTTCACTCTAATAAATGTGATGTTTACTGGAATGGCAGAACTAGCCATGACTGTATTCAGGCTTCCAGTGTTCTACAAACAAAGGGATTTTTTGTTCTTCCCTGCATGGTCCTTTGGGTTACCTATATGGGTTCTAAGGATCCCTCTCTTCCTTATGGAATCAGGGATATGGATTGTTCTTACATATTATACTGTTGGGTTTGCTCCTGGTGCTGATAGATTTTTTCGACAATTCTTGGCATTGTTTGGAATCCATCAGATGGCTCTAACACCAGTTGTTGCTAATACACTGGGTACCTTGACCTTGCAAGTCATATTTGTGCTTGAAGGTTTTATTTTTGCCAAAGACGACATTGCGCCATGGATGATATGGGGTTATTATATATCTCCTATGATGTATGGCCAGAATGCCATAGTGATGAATGAATTCTTAGATAAAAGATGGAGTCAACCAAATACAGATCCTAGAATTGATGCACCAACAGTTGGAAAATTACTTCTCAGATATAGAGGTTTCTATACAGAAGATTATTGGTTTTGGATCTGCATTGGAGCCTTGTTTGGGTTTTCTCTTCTTTTCAATCTTCTATTCGTTGTTGCATTGACTTACTTGAATCCTTTGAGTGATTCGAAAGCAGTCATCGCAGATGAAGGTGAAGGGAACAAAATATCATCCTCCAAACAGCTTATCTTTGAAGAGATGGAAATGAAAAATTCTTCAGAAATTTCCGGTCCTTCGAACCAAGAAGAAAGAAGAGGAATGGTTTTACCGTTTGAGCCTTTATCACTTGCATTCAATCATGTTAGCTACTATGTAGATATGCCTGCTGAAATGAAGAATCAAGGTTTCAGTTCAGATAGACTACAACTACTACAAGATGTGAGTGGTGCTTTCAAACCAGGAATATTGACAGCACTTGTAGGTGTTAGTGGCGCGGGGAAGACAACGCTCATGGATGTATTAGCCGGAAGAAAAACAGGTGGTTACATCAAAGGAAATATTAGCATCTCAGGTTATCCAAAGAACCAAGCAACATTTGCTCGGATTAGCGGTTATTGTGAACAGAATGACATTCATTCTCCACATGTTACTGTCTATGAATCACTATTATTCTCAGCATGGCTTCGTCTTCCTTCAGATGTAAAAACAGAAGCACGAAAGATGTTTGTTGAAGAAGTTATGGAGTTGGTCGAGCTTATACCAATCAAAGATGCATTGGTAGGCCTTCCAGGTGTAGATGGCCTATCAACAGAACAAAGGAAGAGGCTTACTATAGCCGTAGAGCTTGTAGCCAACCCTTCAATCATCTTCATGGATGAACCAACATCTGGACTTGATGCTAGAGCTGCAGCGATTGTTATGCGAACCTTGAGAAATACAGTGGACACCGGAAGAACTGTCGTGTGTACAATTCACCAACCTAGCATAGACATTTTTGAGGCCTTTGACGAGCTATTGTTGATGAAAAGAGGAGGACAAGTTATTTATGCTGGTCCACTTGGTCGCCACTCACATAAACTCATAGAATATTTCGAAGCTATCCCTGGAGTTCCTAAAATCAAGGATGGTTATAATCCTGCAACATGGATGCTTGATCTAAGCTCCATTTCAATGGAGGCTCAATTGGATGTAGATTTTGCAGCCATCTATGCCACCTCTGACCTTTATCAGATGAATCAAGAACTCATCAAGGAGCTCAGTACTCCGACCCCAGGTTCCAAAGACTTTCACAAACAACAAGATTTAATGAACCTTTTGGGAGCTATGTACTCTGCTGTGATCTTCCTTGGAGCGACGAACGCTTCAGCAGTACAACCAGTTGTTGCCATTGAAAGAACCGTCTTCTATCGTGAAAGGGCTGCAGGGATGTATTCTGCATTGCCCTATGCATTTGGCCAGGTGGCAATAGAGGCAATTTACAATGCAATTCAAACTGCCATTTACACTATTATCCTCTACTCCATGATTGGTTTCGAATGGAAGGTGGGGAACTTCTTTTGGTTCTACTACTACATTCTAATGTGTTTCATATACTTCACATTGTATGGAATGATGACTGTTGCTTTGACACCTGGTCACCAAGTTGCTGCCATTTGCATGTCCTTCTTTTTGAGCTTTTGGAACTTGTTCTCTGGCTTCCTCATTCCTAGAACGCAAATCCCTGTGTGGTGGAGATGGTACTATTGGGCTTCTCCTGTTGCATGGACATTGTATGGCCTTATCACCTCTCAACTGGGTGACAAGGATGCAGAACTAGAGATACCAGGAAGTGGAACCATGCCACTGAAGCAACTCCTTAAAGATGTTTTGGGTTTTGACTATGACTTCCTTCCGGTGGTTGCTGTTGTTCATGTAGGCTGGGTGCTTCTTTTCTTGTTAGTCTTTGCCTATGGCATCAAATTCCTCAACTTTCAGAAGAGATAG 4047 0.4228 MASALMTGDDLAMSTSGRRSLTSASFRDVWTAAAEPDVFGRSNRHMQEDDEQHLTWAAIERLPTLDRMRKGVLKQVLDNGEVVHGEVDVTKLGFHDRKILMESILKVVEEDNEKFLHTLRNRVDRVGIEIPKIEVRYENLSAEGDLYVGSRALPTLLNATLHTFESILGLFHLAPSKKKEIQILKDSSGKITYCGHELNEFVAGKTCAYISQHDIHYGEMTVRETLDFSGRCLGVGTRYEMLVELSRREKDAGIKPNPEIDAFMKATAMSGQKTSLVTDYVLKILGMDICADIMVGDEMRRGISGGQKKRLTTGEMLVGPAKVLFMDEISTGLDSSTTFQICKFLRQMVHIMDVTMVISLLQPAPETFDLFDDIILLSEGQIVYQGPRQSVLQFFEHMGFKCPERKGVADFLQEVTSKKDQQQYWSQKDEPYRYVSTSEFAEAFSSFKIGEQLVTELGIPYDKRGVHQAALVKDKYGISNWELFKACFSREWLLMKRSAFVYVFKTTQITIMSIITFTVFLRTQMPVGTVQDGQKFFGALFFTLINVMFTGMAELAMTVFRLPVFYKQRDFLFFPAWSFGLPIWVLRIPLFLMESGIWIVLTYYTVGFAPGADRFFRQFLALFGIHQMALTPVVANTLGTLTLQVIFVLEGFIFAKDDIAPWMIWGYYISPMMYGQNAIVMNEFLDKRWSQPNTDPRIDAPTVGKLLLRYRGFYTEDYWFWICIGALFGFSLLFNLLFVVALTYLNPLSDSKAVIADEGEGNKISSSKQLIFEEMEMKNSSEISGPSNQEERRGMVLPFEPLSLAFNHVSYYVDMPAEMKNQGFSSDRLQLLQDVSGAFKPGILTALVGVSGAGKTTLMDVLAGRKTGGYIKGNISISGYPKNQATFARISGYCEQNDIHSPHVTVYESLLFSAWLRLPSDVKTEARKMFVEEVMELVELIPIKDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTLRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRHSHKLIEYFEAIPGVPKIKDGYNPATWMLDLSSISMEAQLDVDFAAIYATSDLYQMNQELIKELSTPTPGSKDFHKQQDLMNLLGAMYSAVIFLGATNASAVQPVVAIERTVFYRERAAGMYSALPYAFGQVAIEAIYNAIQTAIYTIILYSMIGFEWKVGNFFWFYYYILMCFIYFTLYGMMTVALTPGHQVAAICMSFFLSFWNLFSGFLIPRTQIPVWWRWYYWASPVAWTLYGLITSQLGDKDAELEIPGSGTMPLKQLLKDVLGFDYDFLPVVAVVHVGWVLLFLLVFAYGIKFLNFQKR* 1349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1629 1348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 404 IPR027417 -
Amo06g1629 1348 PANTHER ATP-BINDING CASSETTE TRANSPORTER 187 1118 - -
Amo06g1629 1348 PANTHER ATP-BINDING CASSETTE TRANSPORTER 21 189 - -
Amo06g1629 1348 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1117 1348 - -
Amo06g1629 1348 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 817 1056 IPR003439 GO:0005524
Amo06g1629 1348 Pfam ABC transporter 832 984 IPR003439 GO:0005524
Amo06g1629 1348 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 187 1118 - -
Amo06g1629 1348 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 21 189 - -
Amo06g1629 1348 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 1117 1348 - -
Amo06g1629 1348 SMART AAA_5 841 1033 IPR003593 -
Amo06g1629 1348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 818 1041 IPR027417 -
Amo06g1629 1348 Pfam ABC-2 type transporter 1119 1285 IPR013525 GO:0016020|GO:0140359
Amo06g1629 1348 Pfam ABC-2 type transporter 483 684 IPR013525 GO:0016020|GO:0140359
Amo06g1629 1348 Pfam ABC-2 type transporter 1013 1074 IPR043926 GO:0140359
Amo06g1629 1348 Pfam ABC-2 type transporter 362 438 IPR043926 GO:0140359
Amo06g1629 1348 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 135 404 IPR003439 GO:0005524
Amo06g1629 1348 CDD ABCG_PDR_domain2 801 1039 IPR034003 -
Amo06g1629 1348 Pfam ABC-transporter N-terminal 109 159 IPR029481 -
Amo06g1629 1348 Pfam Plant PDR ABC transporter associated 689 755 IPR013581 -
Amo06g1629 1348 Gene3D - 817 1051 IPR027417 -
Amo06g1629 1348 Gene3D - 163 440 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1629 Amo-Chr6 54666143 54673604 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1629 K08711 - gmx:100786482 2202.94