Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0648 ATGGAGAATGGAGGAAGGGATTTGGCAAGTAAAGAGCAGCATAGCTTTTGTTTTGGGAGGAAAGAGGCGCGTTTGGGATCAATCATCGATATCCTCTTTGCCATTGACTTTGCTTTGGAACATCAGAGTGGCTATCCACTTACAATGGCTGGACTTATTGAAGGACTCCCTGATGCTGTTGCAATAAGGTGCCTTGCTCGGGTTCCCTTCTACCTCCATCCGAAGTTAGAGGTTGTCTGCCGTTCTTGGCAAGCAGCTGTTCGTAGCCCTGAACTATTTAAAGCTCGGCAGGAGGTTGGTTCATCAGAGGAGTTGTTATGTGTCTGTGCTTTTGACCCAGAGAATGTGTGGCAGCTGTATGACCCTCTACGAGATCTGTGGATTACACTTCCGGTTCTTCCCTCAAAAATAAGGCATCTTTCGCACTTTGGTGCTGTTTCCACTGCTGGAAAGTTGTTTGTGATTGGCGGTGGCAGTGACGCAGTTGATCCCTTGACTGGTGACCAAGACGGCTGTTTTGCAACAGATGAAGTCTGGTCATATGATCCGGTAGTCCGGCAGTGGGCCCCTCGAGCATCAATGCTGGTTCCGCGCTCTATGTTTGCATGCTGTGTTTTGAATGGGAAAATTGTTGTGGCTGGGGGCTTCACCAGCTGCCGAAAATCAATATCTCAAGCAGAAATGTATGACCCTGAGAAGGATGTATGGATTCCAATGGCTGATCTTCATCGCACCCACAATTCAGCCTGTTCAGGAGTAGTGATAGGTGGAAAGGTGCATGTGCTGCACAAGGACATGTCAACAGTTCAAGTTTTAGACAATGCGGGGCCTGGATGGATTGTTGAGGAATGCGGGTGGCTCCAAGGTCCTATGGCGGTTGTTCAAGATGCACTTTATGTGATTAGCCATGGATTCATCTTCAAGCAGGACAAAGAAGGGAGAAAGGTGGTAGGTTCAGCTTCCGAGTTCCGAAGGAGAATTGGGTTTGCAATGATAGGGGTGGTTGATGATCTATACGTGATTGGAGGCTTCATTGGCCCTGACAGATGGGACTGGGACATTAAGCCATTATCAGATGTCGATATTCTCACACTTGGGAGTGAGAGACCAAATTGGCGTCAGGCAGCTCCAATGACAAGATGTCGTGGTACTATTCTTGGTTGTACACTGCTGAGAATTTAG 1182 0.4797 MENGGRDLASKEQHSFCFGRKEARLGSIIDILFAIDFALEHQSGYPLTMAGLIEGLPDAVAIRCLARVPFYLHPKLEVVCRSWQAAVRSPELFKARQEVGSSEELLCVCAFDPENVWQLYDPLRDLWITLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGDQDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKSISQAEMYDPEKDVWIPMADLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAGPGWIVEECGWLQGPMAVVQDALYVISHGFIFKQDKEGRKVVGSASEFRRRIGFAMIGVVDDLYVIGGFIGPDRWDWDIKPLSDVDILTLGSERPNWRQAAPMTRCRGTILGCTLLRI* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0648 393 Gene3D - 109 391 IPR015915 GO:0005515
Amo06g0648 393 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP30 50 393 - -
Amo06g0648 393 Pfam Kelch motif 140 194 IPR006652 GO:0005515
Amo06g0648 393 Pfam Kelch motif 197 242 IPR006652 GO:0005515
Amo06g0648 393 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 50 393 - -
Amo06g0648 393 SMART kelc_smart 151 208 IPR006652 GO:0005515
Amo06g0648 393 SMART kelc_smart 209 256 IPR006652 GO:0005515
Amo06g0648 393 SMART kelc_smart 337 392 IPR006652 GO:0005515
Amo06g0648 393 SUPERFAMILY Kelch motif 109 382 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0648 Amo-Chr6 9220622 9224241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0648 56 236 Miscellaneous Gene Families AT4G33900 27.368 1.83e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0648 - - gmx:100800954 658.292