Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0647 ATGAATTCAATGGCGGCATCAAGAAGGGTGATTGAGATGCTGCTTTGTATGTCCTTGTTGGTGATGATGAGAATAACAACAATGGCACAACAAACACAACAATATCCTGAGACTAGTACTTCTTCAAGTTGCAGCAATGTTCTGCTAAGTCTTTCTCCGTGCCTAGATTACATAACAGGAAGTGCTTCAACACCATCATCTGGTTGTTGTTCACAACTTGCATATGTGGTGGGGTCACAGCCACAGTGCCTGTGTGAAGTTGTTAATGGTGGTGCTTCTTCAATTGCTGCCACCCTCAACATCAATCAGACTCAGGCTTTGGGCCTTCCTAATGCCTGCAGATTACAAACTCCTCCAATTACCATCTGCAGTGCTGTTACTGGATCTGTTTCTCCGCCGGCAGGTGTTTATTATGCGCCCAACATTCCAAATTCACCTGCAGCAGGGATTGGATCAACAATTATTTCATCAACGAACGGTGGAGTTGGCGGTGGTTCATTTCACTGGAATTCAAGTTCCACAGCTAAATTACCTTCTTTGCTGCTTGTCATGTTTTTCTTTGCAACGACTTTGTCTTTGACTTTCGCCTTCACGACCATTACCTAG 606 0.4422 MNSMAASRRVIEMLLCMSLLVMMRITTMAQQTQQYPETSTSSSCSNVLLSLSPCLDYITGSASTPSSGCCSQLAYVVGSQPQCLCEVVNGGASSIAATLNINQTQALGLPNACRLQTPPITICSAVTGSVSPPAGVYYAPNIPNSPAAGIGSTIISSTNGGVGGGSFHWNSSSTAKLPSLLLVMFFFATTLSLTFAFTTIT* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0647 201 SMART aai_6 44 123 IPR016140 -
Amo06g0647 201 Gene3D - 41 121 IPR036312 -
Amo06g0647 201 PRINTS Plant phospholipid transfer protein signature 43 59 IPR000528 GO:0006869|GO:0008289
Amo06g0647 201 PRINTS Plant phospholipid transfer protein signature 64 78 IPR000528 GO:0006869|GO:0008289
Amo06g0647 201 PRINTS Plant phospholipid transfer protein signature 100 117 IPR000528 GO:0006869|GO:0008289
Amo06g0647 201 Pfam Probable lipid transfer 27 123 IPR016140 -
Amo06g0647 201 CDD AAI_LTSS 51 115 - -
Amo06g0647 201 PANTHER LIPID TRANSFER PROTEIN 12 197 - -
Amo06g0647 201 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 43 124 IPR036312 -
Amo06g0647 201 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 12 197 IPR043325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0647 Amo-Chr6 9204919 9207657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0647 39 195 Lipid Metabolism Gene Families AT3G22600 41.975 2.00e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0647 - - adu:107493010 347.436