Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0645 ATGAGAGATGAGAACTCCAAGAAAAGCAAGCTTTCATGGCCCAAGACATTGGTCAAGAAGTGGTTCAATATCAAGTGCAAAACTGATAACTTTCAAGCAGATGATGAAGTTGATGATGATGTCCTTTATCAAGGTATTGATGAAGAGAGGAAGAGCAACTATTCAGAGAAGGAGGCATGCACCATCAAAAAAAGCAAAACAGATAAACCAAGCAGAAGATTCTCAGACAGAATTCATGGAGGTAAGAATGACCTTGATCAAGCTCAGATTACAGAAGTGTATAATTATAGAATCTTTGTTGCCACTTGGAATGTAGCAGGGAAGTCACCTCCAAGTTATTTGAACCTTGAAGATTGGCTTCACACCTCTCCACCCGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTTAATGCTGGTAACATTTTGGGAACAGAAGACAATGGCCCTGCAAGGAAATGGCTTGCACTTATTAGGAAGACCCTTAACAGTCTTCCAGGAACAAGTGGTGGATGCCACACTCCATCACCACTCTCTGATCCTATTATAGAGATTGAAGCTGATTTTGAGGGATCAATGAGGCAGAAGACAACCTCTTTCCTCCATAGAAGGTCTTTTCAATCCTTGAGTCATAGTATGAAAATGGATAGTGACATCTCACTGCCACAACCGAGCTTTGATCGGCGTCTCAGCGTCTGTGATAGAATGATATATGCTCACAGGCCTAGTGACTACCGATGGGGTTCTTCAGATGATGAAAATGGAGCTGGGGACTCCCCAGTTACGGCATCCTATTCGCCAGTGCAATATAGCGGTTGTTTCCCTATGGAGGATGTTGAGAAGCAGACAGGGCAACCGAGATATTGTTTGGTTGCTAGTAAGCAAATGGTGGGGATATTTCTAACAGTTTGGGTGAAAAGTGATATCAGAGATTATATTCACAGCTTGAAGGTGTCTTCTGTTGGCAGAGGTTTGATGGGATATCTTGGAAACAAGGGTTCAATATCAATTAGCATGTCTTTGCACCAAACAAGCTTTTGTTTCATCTGTAGTCATTTGACTTCAGGGCAAAAGGATGGTGATGAGCTAAGGAGAAACTTAGATGTAATGGAAATTCTGAGAAAGACAAGGTTTCCCCTTGTCCAAGGCACGAGCGACCAGTATTCGCCTCAGACAATTCTGGAACACGACCGAATAATTTGGCTGGGGGATTTAAATTATCGGGTAGCCCTTTCTTATCGTGCGGCGAAAGCTCTTGTTGAGATGCATAACTGGAAGGACTTGTTAGAGAATGATCAAAGCAGAGGCAAGGTCGAGTATTCGAAGGATGGAACGAAGGGAAAATATACTTCCCTCCCACATACAAGTATTCAAACAACTCAGACAGGTATGCAGGAGATGGAAGACATTCAAAACAAAAGAGAACTCCAGCATGGTAGTGTTCTTAGTGTGATAGAATCTTATGGCATGGGAGAGGCCTTCACCAATTATCTTATGTTCGTGGGGAGTCAAGATTCTCTGATCATAGACCTGTGTATAGCATATTCTCAGCAGAAGTTGATCAAAGAAGCTCTAGTTACTCCAATTAATTATGACTACACTGATTTGAATTTCCTTTGA 1626 0.42 MRDENSKKSKLSWPKTLVKKWFNIKCKTDNFQADDEVDDDVLYQGIDEERKSNYSEKEACTIKKSKTDKPSRRFSDRIHGGKNDLDQAQITEVYNYRIFVATWNVAGKSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNAGNILGTEDNGPARKWLALIRKTLNSLPGTSGGCHTPSPLSDPIIEIEADFEGSMRQKTTSFLHRRSFQSLSHSMKMDSDISLPQPSFDRRLSVCDRMIYAHRPSDYRWGSSDDENGAGDSPVTASYSPVQYSGCFPMEDVEKQTGQPRYCLVASKQMVGIFLTVWVKSDIRDYIHSLKVSSVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDELRRNLDVMEILRKTRFPLVQGTSDQYSPQTILEHDRIIWLGDLNYRVALSYRAAKALVEMHNWKDLLENDQSRGKVEYSKDGTKGKYTSLPHTSIQTTQTGMQEMEDIQNKRELQHGSVLSVIESYGMGEAFTNYLMFVGSQDSLIIDLCIAYSQQKLIKEALVTPINYDYTDLNFL* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0645 541 Gene3D Endonuclease/exonuclease/phosphatase 277 445 IPR036691 -
Amo06g0645 541 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 435 - -
Amo06g0645 541 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 435 IPR045849 GO:0004445|GO:0046855
Amo06g0645 541 Pfam Endonuclease/Exonuclease/phosphatase family 101 409 IPR005135 GO:0003824
Amo06g0645 541 SUPERFAMILY DNase I-like 87 438 IPR036691 -
Amo06g0645 541 SMART i5p_5 230 482 IPR000300 GO:0016791|GO:0046856
Amo06g0645 541 Gene3D Endonuclease/exonuclease/phosphatase 81 201 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0645 Amo-Chr6 9193207 9196097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0645 293 504 Acyl Lipid Metabolism Gene Families AT1G05630 24.231 6.61e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0645 - - adu:107493007 889.797