Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0620 ATGGCTGCGGCTCTGTCACATTCTGATTCTGACTCTAAGATGAAATATTCATGGTGGTGGGACAGTCACATAAGCCCCAAGAACTCCAAATGGCTCCAAGAAAATCTCACAGATATGGATGTCAAGGTGAAGCAAATGATTAAGCTTATTGAAGAGGATGCAGATTCCTTTGCTAGAAGGGCTGAAATGTATTATAAGAAACGGCCGGAGCTTATGAAATTGGTTGAAGAGTTTTACCGTGCATACCGGGCATTGGCCGAGAGATATGATCATGCAACCGGAGTAATTCGCCAGGCTCATCGTACCATGGCTGAAGCATTTCCTAATCAAGTGCCTCCAGTACCAGCAGATGATTTGCCTTTAGTTTCTTCCACAGAGACTGAGCCGCACACACCGGTGACGCCTCACCATTCACATGGATTATTTGACCAACATGGAGCTCCTAATTATGAACCTGATACTGCTATAAGCAAAATGGGTCTAAAACAGCTCAATGATCTCTTCATGTTAGGAGAAGATGCAAGTCATGTGAAGCATTTGGAAGGGCGTGCTAAAAGGGGCCTCACTTTTCTTGATTCAGAGGAGACTAATGGGTTAAAGAATGGAAGCCATGACAATGGAAGTCAAGGCTTATCCGAGTCTGAACGAATGACTAAAGCCGAGACAGAAATTTTGGCCTTAAAGAAAGCTCTTGCTAAATTGGAAAGTGAAAAGGAAGCTGGATTGCTTCAGTATCAGCAGAGTTTGGAGAGATTGTCCAATCTGGAATCAGAAGTGTCTAATGCAAGCGAGAATTCTCAAGGACTTGACGAACGCGCGAGCAAAGCTGAAGCCGAAGTCCAGACCTTGAAGGAAGCCCTTGTTGTATTGCAGGCAGAAAGAGAAGCCAATCTTTTTCAGTACCAGCAGTGCTTAGAGAAAATATCTACTCTGGAGCTAAGCATCTCTTCTGCTCATGATGATGTAAGAGAACTTAATGATCGCGCTATTAAAGCTGAAACTGAAACCGAATCCCTTAAGCATGACCTTGCTAGAATAGAAACTGAAAAAGAAGCTGCAGTTGCCCGAAATAACCACTCCTTGGATTCATTGTCAAAACTGGAGGAGAGATTAGAAGAAGCTGAAGAGAATGCAAGGAGATTGAATGAGGAAGCTAATATAGCTAGAAGTGAAGTTGAGGCGTTGAAGTTGGATATTGCTAAACTTACTGAAGAGAAAGAAGATGCAGCCCTTCGATACGAGCAATGCTTGGAGATAATTTCCAGTTTGAAGCATAAACTCTCATGTGCTGAAAAGGAGGTGTATAAGCTAAAATGGAAGATAGCTGATGAGGCTGAGAAGTTAAAAAGTTCTGAACAGAAGTGTCTTCACCTGGAAACATCAAATCTGTCTCTGCAATCCGAATTGCAGTCATTAACACAGAAGATAAGTTCCCAAAGTGAAGAATTTAGTGAAAAGCAGAAGGAATTGAGTAGACTTTGGACTAGCATACAAGAGGAACGGTTGCGATTTATTGACGCTGAGACTGCTTTCCAAACTCTCCAGAATTTACATTCTAAATCACAGGATGATCTTAGATCTCTTGCAGCCGTGGTCCATAATATGGAGTCCCAAAATCAAGCTTTAGAGGATGAAGTTCACAGGGTCAAGGAGGAAAACAAAATTCTAGATGATGTCAAATTGTCTTCATCCTTGACCATAAAGAATTTGGAGAATGAGATATTGAACTTGAGGGAGACAATCAAGAAACTTGAACAGGAGGTTGGACTGCGAGTCGATGAAAGAAATGCTCTTCAACAGGAAATTTATTGTCTCAAAGAGGAGCTTAATGGTGTGAATAAAAGGCATGAATCCATGATGGAGGATGTAAGATCAACAGGCTTAGACACACAAGACTTTGCCTCATCCGCAAAGAAATTGCAAGATGAGAACTCAAAGCTGAAGGAGGCATGCAAGGTAAATCAAGATGAGAAAGCATCTCTTCTGCAAAGACTGGAAATCATGGAACAGCTTTTGGAGAAAAATTCTGTTATGGAGATTTCTCTTTCAAATTTGAATGCTGAGCTGGAGGCTGTCAGAGAAAAGGTAAAGGTATTAGAAGAAACTTGCCAATCTTTGCTTGCTGAGAATTCCACTCTCGCTGCGGAGAAGGCAACCTTGTTTTCTCAGTTACAAACCACAGCTGAAAATCTGGAGAAACTCTCAGAGAAGAACAAGATTTTAGAAAGTTCACTATGTGATGTGAATGCTGAGCTAGAAGGATTAAGGGTAAAGTCAAAGATCTTAGAAGACTCTTGCCAGTCACTTGATCATGAGAAGTCCAGTCTCTCCTCTGAAAAAGAATACTTGATTTCACAATTGACAGTGGCTCATCAAACACTAGAAGATCTCGAGAAACAACGCACCGAACTTGAACTGAAGCATCTGGATCTAAAGTTGGAAAGGGAGTCCGCACTTCAAAAGGTTGAAGAGCTGCTGGTTTCCTTATATGCCGAAAGAGAAGAGAATTCTCGAGTTGTGCAGTTGAATGAAGATAATTTGGCTGAGAAGGAATTCATGATTCATATTCTCCAAGAAGATGCCAATCACTGGAAAGGGGAATATGACAAGGAAGTAGAAGGGGCTGTCCATGCTCAAATGGAAATTTTCATCTTGCAGAAAAGCATCATGGATCTGGAGCAAAAGAATTTTTCACTGCTAGTAGAGAGTCAGAGACTCTTGGAGGCATCCAAAATGTCTGATAGATTGATATCGAAAGTGGAGAATGACAATGTTCAAAAGCAGGTTGATGAGAACTCCATGTCAGAGAAAATTAAAATACTAAGGATCGGGCTGCTTCAGATATCGAAGACTCTTGACATTAACAGTGAGAACACGTGTGAAGATATTATTGAAAATCAGGAGCTTCTGAACCATATACATAGCAAACTTGAGGAGACACAAGATTGTTTCTTCACAGCTTGCAATGAAAGTGAGAAAATTGCCATTGAGAATTCAGTTCTTGTCACATTCCTCAGGCAATTGAAATCAAAAGCAGAAAATCTTGTGACAGAAAGGGATACCCTTGATGAGGAGTTGAGGACCCAGTCTAAGGAGTTCTTGGCACTGCAAACGGATGTCAAAAATATACTGGAGAAGAATGAGGACCTGAAGTTGACAATAAGAAGGGGAGAACAGAAAATGAAAGTGATGGCGACTGAAATCGAGAATCTATGCAAACAGCTGTCAGAATTGGAAGAGGCTCACAAGAACATACAAGAAGAAAGTTGCAAAACATCTGAGGAGAAAAGTACTCTGTTGAGAAGATTTCTAGATCTGGCGGAAGAGAAAAGTAACTTGGAAGAAGAAATCTGTGCAATGATTCATGAGACAGTAGCTCAATCTAATCTTTCTCTGATTTATCAGAACATCATCTTTGAAAAACTCCTAGCACTTAAGGAGCTGAGTGAAGATCTTGAAAGACTATGTTCGGTAAATACCAACCTTGAGGAGAGATTGAAAACAATGGCATCTGAAATGGAAGATCTGAAGATTGGAAATTCACATCTGAAAGAGTCATTTGTGGTGTCAAACATTGAACTACAACTAGTTGAATCTGTCAATGATCAACTAAATTCTCAGGTTAGAATTGGAAAGCAATTGTTGTCTCAGAAGGAAAAAGAGATTCTGAAAGCCGCAGAGATGTTTAGTGCTTTACGCGATGAGAAAACAGAATTGCAGAGAATGGTGGAACATCTTAAGATCAAGTATGATGAGGCCAGGCGATTACTTGAACACCAAGCTAGCCAAATTTTGGAATTGTCGTCGGAGAAGGATCGCCAAGATCAAGAGCTTGGATGCCTTTGTGAAGTGAATCAGAAGTTGGAGGCTGAAATGAGGCATCTGCAGCAAGAACTTAGGAAAACTAAACTTAGGGAGGAGGAGCTCAGTTATGAACTACAAAAAGGAACAAGGGAGATACAGCAATGGGAAACTCATGCTGCCTCCCTTTTTTCCGGACTACAAATTTCTGCTGTCAACGAGGCGTTACTTGAAGGGAAGGTCCATGAGCTAGCTGAAGCATGTCAGAATCTTGAACGCAGAAGCAACTTCAAGGGTATGGAAAGTGAAAGCCTGAAAGAAAGAGTTAATGAGTTAGAAGGCGAAAATGGAAGACTACAGCGTCAGTTGGCTGCTTATGTTCCTGCTGTCAGTGCTTTGAATGATTGCATAACATCCCTGGAGATGCACACTCTCTTACCTGCAAAATCTATTGACTACAAACAATCAAAGGTTCAGAATTTGGTAAATCAGAAGTGCACTAGTGGTCGGAAAACTGGTGTTTATCAGGATGCTACTGCACCATCACTTCCAGATTTCCAAGACATGCAGAAAAGGATCAATGCAATTGAAGGGGCTGTTAAACAGATGAATGAAAGCTTCAATCCCAAGACTGAAATGAGAGAGATTCAAGAGTTAAAACCTGGAATCAGCAGGCGCCAAGTGAATATTCAACCAAATTGGCATGCTGTTCAGATGGATGAAGCAAAGGAGCGTCGGGGTGGATCCTTTCGCGAACATAAGACAGGGAAGTCAGTGCCAGATATCCCCATAACAGAGATTGAGTGTCTGCCGAAAGACATCATGCTTGATCAAATGGCTGAATGTTCATCTTTTGGTGTAAGTAGGAGAGGAACTCTTGAATCGGATGATCAGTTGCTGGAGTTGTGGGAAACTGCTAACAGGGATGGCACAATTGGCCTGAAAGTCAGCAACTCTCAGAGGATGGCCGCTGCACCTGCTGGCTACCGTCGCCAGGGATCAATCAAGGAACTGAAAAACAGATATCCTTCAGCACATTTCTTCACTGAGAAGGAATTGAGTGTGGACAAAGTAGAGGTCCCAAGAAGTTCAACACAGTCACGTGAAGAAGGAAACAGGAGGAAGGTTTTAGAAAAACTTGATTCTGATGCTCAGAAGTTGACAAATCTTGAAATTACTGTACAAGATTTGATCAAGAGGATTGAAATTAGTGAGAAGAGCACAAGAGGAAAAGATGTTGAGTATGACAATGTGAAAGAGCAGCTAGAAGCTGCTCAGGAGTCCATCACAAAGCTATTTGATGCCAACCACAAGTTGGTTAAGAGTGTCCAAGGTGGTGCCTTGTCCTCTGCTGGGAGGTCCTCAACAGATTCAGATGAGAGTGGTGGTGTCAGAAGGATGAGAATTTCGGCACGGGCTCGGAGAGGATCTGAAAAGATAGGACGGCTGCAGTTGGAGGTGCAAAGACTGCAATTTTTGCTGCTGAAGTTGAACGAAGAAAAACAAGCCAGGGGGAAGACAGTGGTTGATGATCCAAATTCGAGAGTCCTTTTGCGAGATTATCTCTATGGTCAGACAAGAATGAAGTACCAGTTGAGGAAGAAGAAGAAAGCGCACTTCTGTGCATGCATACAACCTCCTACTAAGGGAGATTGA 5457 0.4185 MAAALSHSDSDSKMKYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHRTMAEAFPNQVPPVPADDLPLVSSTETEPHTPVTPHHSHGLFDQHGAPNYEPDTAISKMGLKQLNDLFMLGEDASHVKHLEGRAKRGLTFLDSEETNGLKNGSHDNGSQGLSESERMTKAETEILALKKALAKLESEKEAGLLQYQQSLERLSNLESEVSNASENSQGLDERASKAEAEVQTLKEALVVLQAEREANLFQYQQCLEKISTLELSISSAHDDVRELNDRAIKAETETESLKHDLARIETEKEAAVARNNHSLDSLSKLEERLEEAEENARRLNEEANIARSEVEALKLDIAKLTEEKEDAALRYEQCLEIISSLKHKLSCAEKEVYKLKWKIADEAEKLKSSEQKCLHLETSNLSLQSELQSLTQKISSQSEEFSEKQKELSRLWTSIQEERLRFIDAETAFQTLQNLHSKSQDDLRSLAAVVHNMESQNQALEDEVHRVKEENKILDDVKLSSSLTIKNLENEILNLRETIKKLEQEVGLRVDERNALQQEIYCLKEELNGVNKRHESMMEDVRSTGLDTQDFASSAKKLQDENSKLKEACKVNQDEKASLLQRLEIMEQLLEKNSVMEISLSNLNAELEAVREKVKVLEETCQSLLAENSTLAAEKATLFSQLQTTAENLEKLSEKNKILESSLCDVNAELEGLRVKSKILEDSCQSLDHEKSSLSSEKEYLISQLTVAHQTLEDLEKQRTELELKHLDLKLERESALQKVEELLVSLYAEREENSRVVQLNEDNLAEKEFMIHILQEDANHWKGEYDKEVEGAVHAQMEIFILQKSIMDLEQKNFSLLVESQRLLEASKMSDRLISKVENDNVQKQVDENSMSEKIKILRIGLLQISKTLDINSENTCEDIIENQELLNHIHSKLEETQDCFFTACNESEKIAIENSVLVTFLRQLKSKAENLVTERDTLDEELRTQSKEFLALQTDVKNILEKNEDLKLTIRRGEQKMKVMATEIENLCKQLSELEEAHKNIQEESCKTSEEKSTLLRRFLDLAEEKSNLEEEICAMIHETVAQSNLSLIYQNIIFEKLLALKELSEDLERLCSVNTNLEERLKTMASEMEDLKIGNSHLKESFVVSNIELQLVESVNDQLNSQVRIGKQLLSQKEKEILKAAEMFSALRDEKTELQRMVEHLKIKYDEARRLLEHQASQILELSSEKDRQDQELGCLCEVNQKLEAEMRHLQQELRKTKLREEELSYELQKGTREIQQWETHAASLFSGLQISAVNEALLEGKVHELAEACQNLERRSNFKGMESESLKERVNELEGENGRLQRQLAAYVPAVSALNDCITSLEMHTLLPAKSIDYKQSKVQNLVNQKCTSGRKTGVYQDATAPSLPDFQDMQKRINAIEGAVKQMNESFNPKTEMREIQELKPGISRRQVNIQPNWHAVQMDEAKERRGGSFREHKTGKSVPDIPITEIECLPKDIMLDQMAECSSFGVSRRGTLESDDQLLELWETANRDGTIGLKVSNSQRMAAAPAGYRRQGSIKELKNRYPSAHFFTEKELSVDKVEVPRSSTQSREEGNRRKVLEKLDSDAQKLTNLEITVQDLIKRIEISEKSTRGKDVEYDNVKEQLEAAQESITKLFDANHKLVKSVQGGALSSAGRSSTDSDESGGVRRMRISARARRGSEKIGRLQLEVQRLQFLLLKLNEEKQARGKTVVDDPNSRVLLRDYLYGQTRMKYQLRKKKKAHFCACIQPPTKGD* 1819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0620 1818 Coils Coil 1682 1702 - -
Amo06g0620 1818 Coils Coil 1278 1312 - -
Amo06g0620 1818 Coils Coil 1005 1032 - -
Amo06g0620 1818 Coils Coil 462 489 - -
Amo06g0620 1818 Coils Coil 1453 1473 - -
Amo06g0620 1818 Coils Coil 1145 1179 - -
Amo06g0620 1818 Coils Coil 1341 1361 - -
Amo06g0620 1818 SUPERFAMILY Myosin rod fragments 681 787 - -
Amo06g0620 1818 Coils Coil 724 744 - -
Amo06g0620 1818 Coils Coil 787 814 - -
Amo06g0620 1818 Gene3D - 215 379 - -
Amo06g0620 1818 Coils Coil 245 293 - -
Amo06g0620 1818 Coils Coil 357 419 - -
Amo06g0620 1818 MobiDBLite consensus disorder prediction 194 214 - -
Amo06g0620 1818 Coils Coil 525 559 - -
Amo06g0620 1818 Coils Coil 217 237 - -
Amo06g0620 1818 Coils Coil 1096 1116 - -
Amo06g0620 1818 MobiDBLite consensus disorder prediction 123 143 - -
Amo06g0620 1818 Coils Coil 1040 1088 - -
Amo06g0620 1818 Coils Coil 1654 1674 - -
Amo06g0620 1818 MobiDBLite consensus disorder prediction 1712 1732 - -
Amo06g0620 1818 Coils Coil 637 657 - -
Amo06g0620 1818 Coils Coil 1369 1389 - -
Amo06g0620 1818 Coils Coil 1747 1767 - -
Amo06g0620 1818 Pfam KIP1-like protein 17 90 IPR011684 GO:0003779
Amo06g0620 1818 PANTHER PROTEIN NETWORKED 4A 7 1818 - -
Amo06g0620 1818 Coils Coil 315 349 - -
Amo06g0620 1818 Coils Coil 668 716 - -
Amo06g0620 1818 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 7 1818 - -
Amo06g0620 1818 Coils Coil 567 615 - -
Amo06g0620 1818 Coils Coil 1215 1270 - -
Amo06g0620 1818 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 16 96 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0620 Amo-Chr6 8837724 8844812 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0620 - - gmx:100810726 2324.28