Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0598 ATGCCTTTTACAATGAAGATTCAGCCGATTGATTCTGACGTTTGTGAAGAGACGAGGAGGCTGGAGTTGGTGAAGCCGGTGGCCAAGTGGCGGTTGAAGCGGCTCTTCGAGCGCCAGTTCCCCGGCGTTCTGAGGAGCTCGGCGGCGGCGGTGGAGAAGACCGCCGGCGACGATGCGCATTTCGGCAAAGACGTAGCTGGTGCCGATTTGGAACCGAACTCTGTGTGTCTGGCGAGAATGGTGCAGAGTTTCATGGAAGATAATCACGATAATAAGCACTCGGTTTCCGTTAAGTGTTCCCGTAACCGCTGTAACTGCTTCAACGGCAACTGCGACGACAACTCCGACGGTGAATCGGACGCCGGTTTCGGAGAAACTAACCAGCCTCCCTCCGGCGAAGCTCTCGAAATCCTCAAGGGTTTGGTGGCGTGTGGGAGCAAGAGCGAGAGGAATCTGTTAGCGGACACAGCGAAGATAGTTGAGAAGAACAAGATAATCTGTAAACGCAAAGACGGCGATTGCAGAAAGCTCGTCACGGAGGCTTTGTTAGCTCTTGGCTACGATGCTGCAATCTGCAAATCTCGCTGGGAGAAAACTCCTTTCTATCCCGCTGGGGAATACGAGTACATTGATGTGATAATTGGGAACGAGAGAGTGGTGGTTGACGTTGATTTCAGATCGGAGTTCGAGATTGCTCGCCCGACCAAGGCGTACAAGGCGATCCTTCAAACTGTTCCGTACATATTCGTTGGCAAGTGTGAGCGGTTGCAGAGTATGGTGGCGATTGTGTCGGAGGCGGCGAAGCAGAGCTTGAAGAAGAAGGGAATGCCGGTTCCGCCGTGGAGGAAGGTCGAATACGTCAGAGCGAAATGGCTCTCCCCTCACACGCGAGTTTTTCCGCCTTCCTCCTCGCAAGGGATCAAAAACAACGCGGAGGAAAACCAGGTTTTGGCCGGCGGCGCCGGCGAGTTTAAAGTGAGTCGTGGCGAGTCGGATGAGTCTAATATTGTGATCCAATCCAAACCACCGGAGATAAAGGCCAAGAGCTCGCTCTCTGCTTTGGCTGCTGTGTTAAATGAAACCCCATAA 1089 0.5326 MPFTMKIQPIDSDVCEETRRLELVKPVAKWRLKRLFERQFPGVLRSSAAAVEKTAGDDAHFGKDVAGADLEPNSVCLARMVQSFMEDNHDNKHSVSVKCSRNRCNCFNGNCDDNSDGESDAGFGETNQPPSGEALEILKGLVACGSKSERNLLADTAKIVEKNKIICKRKDGDCRKLVTEALLALGYDAAICKSRWEKTPFYPAGEYEYIDVIIGNERVVVDVDFRSEFEIARPTKAYKAILQTVPYIFVGKCERLQSMVAIVSEAAKQSLKKKGMPVPPWRKVEYVRAKWLSPHTRVFPPSSSQGIKNNAEENQVLAGGAGEFKVSRGESDESNIVIQSKPPEIKAKSSLSALAAVLNETP* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0598 362 PANTHER OS03G0796600 PROTEIN 25 355 IPR006502 -
Amo06g0598 362 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 176 297 IPR006502 -
Amo06g0598 362 Pfam PDDEXK-like family of unknown function 79 297 IPR006502 -
Amo06g0598 362 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 25 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0598 Amo-Chr6 8598281 8600558 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0598 - - ahf:112754473 701.049