Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0594 ATGGCTATTGCCCTGAAATCAGCTTGCTTCTTGCAATTGAAGAAACCAGAGGTCAATTTCCAGGGCTTTCTTCCCTCCAAGAGAGCTATTGTTTCAGTAAAGAGGTATACTCCAGTGGCCGCTATCAAGACGATGGAAACAGTTGGGCTCTCTGAAACCTTCACTAGGCTGAAGAAACAAGGAAAAGTGGCATTCATTCCATACATCACAGCTGGTGATCCTGATCTTTCAACCACAGCAGAAGCACTGAAAGTTCTTGATTCATGTGGCTCCGACATAATTGAGCTAGGTGTTCCATACTCAGATCCTTTGGCAGATGGTCCTGTTATCCAGGCTGCTGCTACTCGTTCTCTAGCAAAGGGTACCAATTTTGATGCTATTATCTCTATGTTGAAAGAGGTTGTTCCACAATTGTCTTGTCCAATTGCACTTTTTACTTATTACAATCCGATACTGAAGCGTGGTACTGAGAGATTTATGTCTACCATTAGAGACTGTGGTGTTCACGGACTTGTAGTTCCCGATGTTCCTCTGGAAGAGACAAAAACTTTAAGGATGGAAGCAAAGAACAATGGAATTGAACTGGTACTCTTGACCACACCTACCACACCAACAAACAGAATGAAAGCCATTGTGGATGCGTCCGAAGGATTTGTGTATCTTGTGAGCTCAGTGGGTGTCACCGGAGCCCGAGCATCGGTTAGTGATAAGGTTCAAACTCTTTTGCAGGAAATCAAAGAGGCAACAACTAAGCCAGTGGCAGTTGGTTTCGGGATATCAAACCTGAGCATTGGTTACTTTTCATACTCAAATCAACAATTTTTGACTTATGATACAGTAGCAGGATGGGGGGCAGATGGTGTGATTGTTGGAAGTGCTATGGTGAAGCTGCTTGGTGAGGCTAATTCGCCTCAAGAGGGATTGAAAGAACTGAAAACTTAA 942 0.4363 MAIALKSACFLQLKKPEVNFQGFLPSKRAIVSVKRYTPVAAIKTMETVGLSETFTRLKKQGKVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLAKGTNFDAIISMLKEVVPQLSCPIALFTYYNPILKRGTERFMSTIRDCGVHGLVVPDVPLEETKTLRMEAKNNGIELVLLTTPTTPTNRMKAIVDASEGFVYLVSSVGVTGARASVSDKVQTLLQEIKEATTKPVAVGFGISNLSIGYFSYSNQQFLTYDTVAGWGADGVIVGSAMVKLLGEANSPQEGLKELKT* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0594 313 SUPERFAMILY Ribulose-phoshate binding barrel 50 301 IPR011060 -
Amo06g0594 313 CDD Tryptophan_synthase_alpha 64 312 IPR002028 GO:0004834|GO:0006568
Amo06g0594 313 Gene3D Aldolase class I 49 313 IPR013785 -
Amo06g0594 313 PANTHER TRYPTOPHAN SYNTHASE, ALPHA CHAIN 45 312 IPR002028 GO:0004834|GO:0006568
Amo06g0594 313 TIGRFAM trpA: tryptophan synthase, alpha subunit 54 312 IPR002028 GO:0004834|GO:0006568
Amo06g0594 313 PANTHER TRYPTOPHAN SYNTHASE ALPHA CHAIN 45 312 - -
Amo06g0594 313 ProSitePatterns Tryptophan synthase alpha chain signature. 94 107 IPR018204 GO:0004834
Amo06g0594 313 Coils Coil 231 251 - -
Amo06g0594 313 Pfam Tryptophan synthase alpha chain 54 311 IPR002028 GO:0004834|GO:0006568
Amo06g0594 313 Hamap Tryptophan synthase alpha chain [trpA]. 60 311 IPR002028 GO:0004834|GO:0006568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0594 K01695 - gmx:732610 476.863