Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0567 ATGGCGGTCATGGCTTCAACCGCAAACATGCTCATTGCATTCCAACCCAATAATAATGCTAATCTCCGCAAACTTCAACCACCGCCATCCATATCATCATCTTTAACCACCCCAAGAAAATCCATTAATTCTACCACATTATGTAAGGCCACCACCTCCACTACTAGTACCAATAATTCATCTCTATCTTCCACCATCACAGAACTCCAAGAAACACCTTCTCCCCCAAAACAACCACAACCAGACATATCCTCCGTGTGGCGCAAGCTCCACGGCGAAGACAACTGGGTCGGGCTTCTGGACCCAATGGATCCTCGCCTTCGGGCAGAGCTCATCCGCTACGGCGAGATGGCACAGGCTTGCTACGACTCCTTCGACTATGACCCATACTCTAAGTATTGTGGAAGCTGCAGGTACCCTCGAGAAGAATTCTTCGAGTTGCTGGATATGAGGCACTTGGGTTACTCGGTGAGTCGTTATATTTACGCGACGGCCAACATCAACCTGCCCAAATTCTTCAGGAGATCGCGGTGGCCACACAAATTGTGGAGCCAGCACGCAAACTGGGCAGGCTATGTGGCGGTTTCCGACGACGAGACGAGCAAGAAGCTGGGGAGGAGGGATATAACCATTGCGTGGAGGGGGACGGTGACGCACGTGGAATGGGTGGCGGATCTGATGAACTACCTGAGGCCGATATCGCCGGAGGTGGCGTGCGACGACCCTGAGGTGAAGGTGGAGGCGGGGTTCTTAGATCTCTACACTGACAGAGAACCCAGCTGTGGATACTGCAAGTACTCTGCCCGACAGCAGGTACTGGCGGAGGTGAAACGGCTGATAGAGAAGTACGAAGATGAAGAAGTGAGTGTTACGATAACAGGTCACAGCTTGGGTAGTGCCATGGCTATATTAAGCGCCTTTGACATTGCGGAAACGGGGTTGAACGTGAAGAAGGAGAACAAGAGCGTACACGTGTCGGTTATAACGTTCTCGGGGCCAAGAGTGGGAAACCTGAGGTTTAAGGAGAGATTGGAATCCAAACACGGCGTCAAAGTGCTTAGGGTTCACAACACTCACGACATGGTTCCAAAGTCTCCGGGATTTCTCATCAATGAGACCTCGCCAGAGTGGCTTTTCAAGCTGGCACAGGGCCTGCCTTGGAGTTACACACACGTTGGGGTGGACCTGGAGTTGGACCACAAGAACTCACCATACTTGAACCCCAATGGCGATAGTGCTTGTGCCCATAACTTGGAGGCCCATTTGCATTTGCTTGACGGGTACCATGGGAGGAAGCGTGAATTTGAGTCGAGCAGTGGGAGGGACGTGGCGTTGGTGAACAAGGACTGTGATTTCCTGAGAGATGAAGAGAGCGTGCCACCAGCTTGGAGGCAAGACTTGAATAGAGGCCTTGTTCGGGGCCCACATGGACGATGGATGCAGCCTGACCGCCCTACACTTGTTCATGATCATCCTCAAGACACTGATCTTCATCTCAACCAACTAGGCCTCCTCTAG 1518 0.5211 MAVMASTANMLIAFQPNNNANLRKLQPPPSISSSLTTPRKSINSTTLCKATTSTTSTNNSSLSSTITELQETPSPPKQPQPDISSVWRKLHGEDNWVGLLDPMDPRLRAELIRYGEMAQACYDSFDYDPYSKYCGSCRYPREEFFELLDMRHLGYSVSRYIYATANINLPKFFRRSRWPHKLWSQHANWAGYVAVSDDETSKKLGRRDITIAWRGTVTHVEWVADLMNYLRPISPEVACDDPEVKVEAGFLDLYTDREPSCGYCKYSARQQVLAEVKRLIEKYEDEEVSVTITGHSLGSAMAILSAFDIAETGLNVKKENKSVHVSVITFSGPRVGNLRFKERLESKHGVKVLRVHNTHDMVPKSPGFLINETSPEWLFKLAQGLPWSYTHVGVDLELDHKNSPYLNPNGDSACAHNLEAHLHLLDGYHGRKREFESSSGRDVALVNKDCDFLRDEESVPPAWRQDLNRGLVRGPHGRWMQPDRPTLVHDHPQDTDLHLNQLGLL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0567 505 MobiDBLite consensus disorder prediction 20 84 - -
Amo06g0567 505 MobiDBLite consensus disorder prediction 20 73 - -
Amo06g0567 505 Coils Coil 266 289 - -
Amo06g0567 505 Pfam Lipase (class 3) 211 368 IPR002921 GO:0006629
Amo06g0567 505 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 5 501 - -
Amo06g0567 505 CDD Lipase_3 141 402 - -
Amo06g0567 505 PANTHER PHOSPHOLIPASE A1 5 501 - -
Amo06g0567 505 SUPERFAMILY alpha/beta-Hydrolases 112 426 IPR029058 -
Amo06g0567 505 Gene3D alpha/beta hydrolase 86 494 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0567 Amo-Chr6 8333247 8335503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0567 12 504 Acyl Lipid Metabolism Gene Families AT2G30550 53.409 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0567 - - gmx:100815007 690.649