Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0564 ATGGCATCCATCTTTGCTAGCACCACAACTCCATCGATCACCCGCGTAGGTCTCTTGCCCAAGCGAGCTCTCGGGGTTTCATCCTCAACCGTTCTTGGGTTGCCAGCAATGGGGAAGATGGGAAGAGTGAGGTGCTCCATGGAGGAGGGAAAGGCTTGTTCACATGATAGCAACTCGAAGATGGGGATGGGGATGGGGGCATCCTTGATGGCAGCTGCTATGGCTGCAAGCATGTCGAGCCCAGCCATGGCTCTTGTGGATGAGAGGCTGAGCACCGAAGGAACAGGGCTTCCATTTGGTCTGAGCAACAACCTCCTTGGTTGGATCCTGTTTGCTGTGTTCGGTCTCATATGGGCTCTCTACTTTGTCTACACCTCCGATCTTGAAGAGGACGAAGAGTCCGGATTGTCTCTCTAA 417 0.5372 MASIFASTTTPSITRVGLLPKRALGVSSSTVLGLPAMGKMGRVRCSMEEGKACSHDSNSKMGMGMGASLMAAAMAASMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFAVFGLIWALYFVYTSDLEEDEESGLSL* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0564 138 Pfam Photosystem II reaction centre W protein (PsbW) 1 138 IPR009806 GO:0009507|GO:0009523|GO:0015979
Amo06g0564 138 PANTHER PHOTOSYSTEM II REACTION CENTER W 1 138 - -
Amo06g0564 138 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 138 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0564 Amo-Chr6 8317949 8318980 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0564 K02721 - gmx:100305788 155.221