Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0563 ATGCCACCGCCGCCGACGATGAAGAAGATTCGCCGGTGGCAGAGGACTTTGATCCTCGCTCTTCTCTCCCTCTCCGTTGTCGCTCCTCTAATCTTTGTCTCGCACAGGCTCAATTTTCTTACACCCGATGGAAGAAGAGATTTTCTCGATGATTTGTCAAGCTTCGCATACAAGCCAGATCCTTTGAAGTTGAGTGCTATAGAACAGGAAAGTGCTGAAGAGTTAGAAGAACCGAAGCAAGTTGTTTATAAAGAAAATGACTTTGGCGTAGCAATCAGTAACAATTCAGAAAGAACCAATGATTCTGAGGATTCTTTAACTGATGGGAGCAGAAGTAACCTTTTGGAAGTTAATGTTTCAGAAGTAGATCACCATGAAAGACAAGTAGAGGAAGCTCAGCAGAAAGGATTATCCCTCACTGATGGAGATAAGAGGAATTTAAACGAGACAGTTATGCACAATCTGGATATATCCACCAACTCCCAAAGTACAAGAAGTGAGAATATTGAAGTGGGAGATAAGCAATCTGATCGGAAAGCAACTCGTCGCCATCAGAATTCGCGATCTCAATACCGTAAAGTGACAAATCACAAGGTTGAGGAAATAAAGGATCAAATAGTTAGAGCTCGAGCATACTTGAGCTTTGCTCCCCCAGGCAGCAACTCTCACTTGGTCAAGGAGTTGAAACTGCGAATTAAAGACATGGAACGCGTAGCTGGAGAAGCTACCTATGATTCAGATCTGCCAAGGAGTGCTTTGCAGAAAATGAGGCACATGGAGGCTTCACTATCTAAAGCCAACCGAGCTTTCCCAGATTGCTCTTCTATGGCTTCTAAGCTCCATGCGATGAATCATAATGTTGAAGAGCAACTTCGTTCTCAGCAACGTCAAGCAACATATCTTGTTCATCTTGCTGCAAGGACCACCCCAAAAGGTCTTCACTGTCTTTCTATGCGGCTAACTGCCGACTACTTTGCACTCGGACCCGAGCAGAGGAAGTTCCCAAATGAAAACAAGTTTAATGATCCAAAACTTTATCACTATGCTGTGTTCTCTGACAATGTTTTGGCATCTGCAGTGGTTGTTAACTCTACTGTCTCTGCTGCTAAGGAGGAGGAGAAAATTGTTTTCCATGTAGTGACCAATTCACTCTACTTTCCTGCAATCTCAATGTGGTTCTTGTTAAACCCTCCTGGCAGTGCCACAGTCCACATACAGAACATGGACAACTTTAAATGGTTATCGAAGTACAGCACCTCCAAGAAATATGATTCTAATGATCCAAGATATACTTCTGAATTGAACTACCTACGTTTCTATCTGCCAGAAATCTTCCCTGCTCTACATAAGATTGTGCTTTTTGATCATGATGTGGTGGTGCAACAAGATCTGAGTGGATTATGGAATGCCAATATGGAAGGAAAAGTAATTGGAGCAGTTCAGACTTGTGAGGAAAGCGAATCTTCATTTCGTAGAATGAATATGCTCATAAACTTTTCAGATCCATTCATTGCAAAGAGGTTTGATGTCAATGCTTGCACATGGGCATTTGGGATGAATTTGTTTGATTTACAGCAGTGGAGGAGACATAATTTAACTGCTGTCTATCACAAATATCTGCAAATGGGTTCTAAGAGGCCATTGTTTAACACCGGAAGTCTGCCTTTAGGCTGGCTCACCTTCTATAACAAGACAATGGTTTTGGACAGACGGTGGCAAGTTCTTGGCCTTGGTTCTGATTCTGCTGTTGACGGAAATGAGATTGAGCAGTCTGCTGTTATACATTATGATGGAGTTAGAAAGCCATGGCTGGATATTGCGATGAGAAGATACAAGAACTATTGGACCAAATTTGTGAATTTTGACTGCCCTCTTCTGCAAAGATGCAATCTCCAGGCGTAA 1902 0.4243 MPPPPTMKKIRRWQRTLILALLSLSVVAPLIFVSHRLNFLTPDGRRDFLDDLSSFAYKPDPLKLSAIEQESAEELEEPKQVVYKENDFGVAISNNSERTNDSEDSLTDGSRSNLLEVNVSEVDHHERQVEEAQQKGLSLTDGDKRNLNETVMHNLDISTNSQSTRSENIEVGDKQSDRKATRRHQNSRSQYRKVTNHKVEEIKDQIVRARAYLSFAPPGSNSHLVKELKLRIKDMERVAGEATYDSDLPRSALQKMRHMEASLSKANRAFPDCSSMASKLHAMNHNVEEQLRSQQRQATYLVHLAARTTPKGLHCLSMRLTADYFALGPEQRKFPNENKFNDPKLYHYAVFSDNVLASAVVVNSTVSAAKEEEKIVFHVVTNSLYFPAISMWFLLNPPGSATVHIQNMDNFKWLSKYSTSKKYDSNDPRYTSELNYLRFYLPEIFPALHKIVLFDHDVVVQQDLSGLWNANMEGKVIGAVQTCEESESSFRRMNMLINFSDPFIAKRFDVNACTWAFGMNLFDLQQWRRHNLTAVYHKYLQMGSKRPLFNTGSLPLGWLTFYNKTMVLDRRWQVLGLGSDSAVDGNEIEQSAVIHYDGVRKPWLDIAMRRYKNYWTKFVNFDCPLLQRCNLQA* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0563 633 MobiDBLite consensus disorder prediction 122 144 - -
Amo06g0563 633 MobiDBLite consensus disorder prediction 93 112 - -
Amo06g0563 633 PANTHER HEXOSYLTRANSFERASE 7 632 - -
Amo06g0563 633 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 348 622 IPR029044 -
Amo06g0563 633 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 7 632 IPR029993 GO:0047262
Amo06g0563 633 MobiDBLite consensus disorder prediction 158 194 - -
Amo06g0563 633 Coils Coil 277 297 - -
Amo06g0563 633 MobiDBLite consensus disorder prediction 170 184 - -
Amo06g0563 633 SUPERFAMILY Nucleotide-diphospho-sugar transferases 346 630 IPR029044 -
Amo06g0563 633 Pfam Glycosyl transferase family 8 315 607 IPR002495 GO:0016757
Amo06g0563 633 Coils Coil 115 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0563 Amo-Chr6 8311576 8317939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0563 7 633 Glycosyltransferase AT1G06780 50.779 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0563 K13648 - gmx:100811619 925.235