Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0504 ATGATGACTTCTCAATTTCTCTTCAATCTAGATCATACGGTTCTTTACTCTGATCTTAGTGCACCTTCACACAAATCTAGATTTGGATTCAAGTTCTTCCTTCAAGGTCCTCCTGCTAAGTTTTGGGGTATCTTGGTTGGAACATCATCATTTCTAATAATACGTACATATTCTCACCAAATCATTATTGAAGGAAAATATGCAAAGAAAAGTGGTGGATTTCGTCCAATATCTGCAGCATCACATCCAGCTCTTGGATTCAAGGAGGGTGGGCCGTACTTCAAATGGCTACAAACTTTGAAGGACGACGTTGAATCAACTGAGGAACATGTTTTTCATCAGGTGGTGGTGACAAACGAGATAAGAAAGAAGATAAATGTGGTGAAAAGGATGTTAGGGTCAATGGAAGATGGAGAAATAAGCATATCAGCTTATGACACAGCATGGGTTGGTCTGGTGAGAGATGTTAATGGCGGAGGAGGACCTCAGTTCCCATCTTGTCTTGAATGGATAGCCAGTAATCAGCTTTCTGATGGTTCTTGGGGTGATGCTCAACTTTTCAATGCCCATGATCGCATTCTTAACACCTTGGCTTGTGTTATTGCATTGAGAGCATGGAATTTGCACCCCCAAAAATCTCACATAGGGCTGAAGTTTGTGAAGGAAAATCTAAGCAAGCTTGAGGATGAGAATGTTGAACATATGCCAATCGGGTTTGAAGTAGCTTTCCCTTCTCTTCTCGACTTGGCTCGAAGTATGAATATTGAAGTGCCACATGATTCTCCTATCTTGAAACAAATCTTTGCCATGAGAGACCTAAAACTCACGAAAATACCAATGGAGGTGCTTCATAAGGTTCCCACAACACTGCTTCATAGTTTGGAGGGAATGGCAAACTTGGATTGGAAAAGACTCTTGAAATTGCAGTCACAAGATGGTTCATTCTTGTTCTCTCCATCATCCACAGCCTACGCTTTCATGCAAACCAATGATGAAAATGCTCTCAAATATTTGGAGAAAACTGTGAAAAGGTTTAACGGGGGAGTTCCAAACGTTTATCCCGTGGATTTATTTGAGCACATTTGGGCTGTTGATCGATTAGAACGTTTAGGTATTTCAAGATATTTTCAGACAGAAATTAAAGAATGTATGGAATATGTTTCAAGATATTGGACCGAGAAGGGTATTTGTTGGGCAAGAAATTCGGAAGTTCAAGATATTGACGATACTGCAATGGCATTTAGATTGCTAAGGTTACATGGCCACCAAGTTTCACCCGATGCATTCAAGCATTTTGAGAAAAGTGGCGACTTCTTCTGCTTTGCTGGACAATCAAATCAAGCTATAACTGGGATATACAATCTTCATAGAGCTTCTCAAGTGTTGTTTCCTGGAGAGAAGATTCTTGAGAATGCCAAACTTTTTTCGTCCAAATTTTTAACTGAGAAACGGTTGGCTAATGAGATAGTGGATAAATGGATCATAACAAAAGATTTGCCTGGTGAGGTGAGCTATGCTTTGGATGTGCCTTGGTATGCTAGCTTACCCCTGTTGGAGACAAGATTTTACATAGAACAATATGGCGGTGAAAATGATATTTGGATTGGCAAGTCACTTTACAGGATGCCATACGTGAATAATGATATTTATCTGGAGCTTGCTAAATTAGATTACAACAACTGCCAAGATATGCTCTCTGCAGAATTGGAGAAAATCCAAAGGTGGTACTTGGAAACAGGATTAGAGGAATTTGGAGTGAGCAAAGAAAGTGTTCTGCAAAGTTATTTTGTGGCAGCAGCCAGCGTGTTCGAGCCTGAGAGGTCCCTAGAGCGACTCTCATGGGCTAAAACCACGACTTTGATCGAGACATTGAAGTCCTATACAGGGGATGAAGAAGCAAGGAGGGCTTTTGTAGAACAATTCAATAACAGCATTAACAGACAAGATTTTCCAAAAAAGTGGCTAGATAAGAACAACAAAACAGAAAAACTTGTTTGGATTTTGCTGATAACTATTGAGTATCTTGGATTGGAGTTTTTTCGAACTCGTGGGCAGGAAATTTCTCATTATTTGAATCAAATTTGGGAAAGTTGGTTGTTTAGTTGGCAAAAAGAAGGAAGCAGTTCCACAAGGGAAGCGGAGCTGATTTTGAAAACCATACATATAATGAGTGGCTGTTGGTCACAAGAGCTACAGCTAAATCTTCAGTATCAGAAATTGCTGCAAGTCACTAACAAAGTTTGCCATAAACTCAGATGTTACCAAAGTAGTAAGGAGGCAAATGTGAATGGCAGCTGCAACATGAGTGGAACCAGAGTCACCACACCACAAATAGAATCAGAAATGCAAGAGCTTTTGCAAACAGTGCTCCAAAATTCCCCAGATGGCATTCAAAATCAACCCCGTGTTAAGAATTCATTTCTTCTGGTGGCCAAGAGTTTCTACTATGCTGCCTATTTTGACGATCAGACAATTATATCACACATTGACAAAGTTCTATTTCAAAAAGTGATGTAA 2517 0.3985 MMTSQFLFNLDHTVLYSDLSAPSHKSRFGFKFFLQGPPAKFWGILVGTSSFLIIRTYSHQIIIEGKYAKKSGGFRPISAASHPALGFKEGGPYFKWLQTLKDDVESTEEHVFHQVVVTNEIRKKINVVKRMLGSMEDGEISISAYDTAWVGLVRDVNGGGGPQFPSCLEWIASNQLSDGSWGDAQLFNAHDRILNTLACVIALRAWNLHPQKSHIGLKFVKENLSKLEDENVEHMPIGFEVAFPSLLDLARSMNIEVPHDSPILKQIFAMRDLKLTKIPMEVLHKVPTTLLHSLEGMANLDWKRLLKLQSQDGSFLFSPSSTAYAFMQTNDENALKYLEKTVKRFNGGVPNVYPVDLFEHIWAVDRLERLGISRYFQTEIKECMEYVSRYWTEKGICWARNSEVQDIDDTAMAFRLLRLHGHQVSPDAFKHFEKSGDFFCFAGQSNQAITGIYNLHRASQVLFPGEKILENAKLFSSKFLTEKRLANEIVDKWIITKDLPGEVSYALDVPWYASLPLLETRFYIEQYGGENDIWIGKSLYRMPYVNNDIYLELAKLDYNNCQDMLSAELEKIQRWYLETGLEEFGVSKESVLQSYFVAAASVFEPERSLERLSWAKTTTLIETLKSYTGDEEARRAFVEQFNNSINRQDFPKKWLDKNNKTEKLVWILLITIEYLGLEFFRTRGQEISHYLNQIWESWLFSWQKEGSSSTREAELILKTIHIMSGCWSQELQLNLQYQKLLQVTNKVCHKLRCYQSSKEANVNGSCNMSGTRVTTPQIESEMQELLQTVLQNSPDGIQNQPRVKNSFLLVAKSFYYAAYFDDQTIISHIDKVLFQKVM* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0504 838 Gene3D - 144 356 - -
Amo06g0504 838 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 145 327 IPR008930 -
Amo06g0504 838 Pfam Terpene synthase family, metal binding domain 551 705 IPR005630 GO:0000287|GO:0010333|GO:0016829
Amo06g0504 838 Gene3D - 128 559 IPR036965 GO:0010333|GO:0016829
Amo06g0504 838 SUPERFAMILY Terpenoid synthases 546 746 IPR008949 -
Amo06g0504 838 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 115 541 - -
Amo06g0504 838 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 312 532 IPR008930 -
Amo06g0504 838 SFLD Terpene Cyclase Like 1 N-term 115 541 - -
Amo06g0504 838 Pfam Terpene synthase, N-terminal domain 301 507 IPR001906 GO:0010333|GO:0016829
Amo06g0504 838 Gene3D Farnesyl Diphosphate Synthase 561 838 IPR008949 -
Amo06g0504 838 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 111 835 - -
Amo06g0504 838 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 111 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0504 Amo-Chr6 7098047 7103806 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0504 K04120 - gmx:100807519 1059.67