Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0502 ATGGAGCTAAGCAAAGTAACGCTAGAGATCTTCTCCAAACTAGAGCAGCAATGGCTCTCTCACTACGAAGCCAACGGAAAAACCCGCATTCTCAGCATCGATGGCGGAGGCAATACCGCCACTGTCGCTGGCGCTGCTCTTATCCATCTCGAGGACCAGATCCGCGCTCACACCTCCGATCCTCACGCTCAAATCGTCGATTTCTTTGACATCATTGCCGGTACCGGCATTGGTGCCATCCTTGCTGCTATGATCACTGCCGACGACGGCTTTGGTAGGCCCCTCTACACAGCTAGAGACGCCGTCGGTCTCCTTGCCGACAGAAATCACGAGCTATACAAACTCAAACACGACGGAATCTTCCGCCGGCGCAAGAGATTCTCTTCCAAGAACATGGACAATGTGCTTAAGCAAATTTTCAGTAGAAAAGAGGAAGAAAAGTTGCTTACCTTGAAGGACACGTGCAAGCCGTTGCTCATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCGTTCGTGTTCTCCCGCGCCGACGCGTCTGAGTCGCCGAGTTTCGACTTCGAGCTCTGGAAAGTGTGCCGCGCCACCTCTGCGACTCCGAACCTCTTCAAGCCATTCCACTTCGCCTCGGTAGACGGTAAGACCTCCTGCTCCGCCATCGACGGCGGAATCGTCATGAACAACCCTGCGGCATTAGCCGTCACGCACGTCCTCCACAACAAGCGCGACTTCTCGTCGGTGAACAGCGTTGAGGACCTACTCGTCCTGTCAATCGGAAACGGAGCTCAAGCGAAGAAGGTTCGAGACGTCGGCGAGTGCTCGACGTCGTCGGTGGTCGACATTGCCATCGGCGGCGTTTCCGAGACCGTTGACCAGATGCTTGGGAACGCCTTCTGTTGGAACCGCACGGACTACGTGAGAATCCAGGCGTTCGGTATGGAAGAGGAGGTGCTTAAGGAGAGGGTGCTTGAGTCATTACCGTTTGGTGGGAAGCGTTTATTGCAGGAAACTAACGGTAACAGAATCGAAAGCTTTGTGCAGCGCCTTGTTGCCATCGGAAAAGCTAGCCTCCCACCCAGTCCCTGTAAGGGTCCGCTGTGA 1098 0.5492 MELSKVTLEIFSKLEQQWLSHYEANGKTRILSIDGGGNTATVAGAALIHLEDQIRAHTSDPHAQIVDFFDIIAGTGIGAILAAMITADDGFGRPLYTARDAVGLLADRNHELYKLKHDGIFRRRKRFSSKNMDNVLKQIFSRKEEEKLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATSATPNLFKPFHFASVDGKTSCSAIDGGIVMNNPAALAVTHVLHNKRDFSSVNSVEDLLVLSIGNGAQAKKVRDVGECSTSSVVDIAIGGVSETVDQMLGNAFCWNRTDYVRIQAFGMEEEVLKERVLESLPFGGKRLLQETNGNRIESFVQRLVAIGKASLPPSPCKGPL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0502 365 PANTHER PATATIN-LIKE PROTEIN 6 2 362 - -
Amo06g0502 365 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Amo06g0502 365 SUPERFAMILY FabD/lysophospholipase-like 26 314 IPR016035 -
Amo06g0502 365 Gene3D Cytosolic phospholipase A2 catalytic domain 17 355 - -
Amo06g0502 365 CDD Pat17_PNPLA8_PNPLA9_like 30 309 - -
Amo06g0502 365 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Amo06g0502 365 PANTHER PATATIN 2 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0502 Amo-Chr6 7069935 7071247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0502 1 362 Acyl Lipid Metabolism Gene Families AT3G63200 69.624 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0502 - - gmx:100806989 590.112