Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0454 ATGGGGATCAAAGAGGACGTGGAGGATGGTGTAGAGAAGAATGGAATCAGAGAGCCATTAATTTCTGACCATGCAAGCAACAAAGGACATCCATGGATGGTTTACTTCACAACATTGGTTGCTGTCTGTGGTTCCTATGAATTTGGAACTTGTGCTGGATATTCTTCTCCTACTCAAGATGCTATTAGAAGTGATCTTGGTCTGTCATTGGCAGAGTATTCTTTGTTTGGCTCCATCTTGACTTTCGGCGCCATGATTGGCGCCATAACAGCCGGACCGATTGCTGATTTGATTGGTCGAAAAGGGGCAATGAGGGTGTCAAGTGCATTCTGTGTTTCAGGCTGGCTTGTCATTTTCTTTTCTGAGGGTCCAATACCTTTAGACATAGGGAGGCTAGCAACTGGATATGGAATGGGATCTTTTTCATATGTGGTTCCTGTCTTCATAGCAGAGATTGCACCAAAAGAACTCCGAGGTGCTCTCACTGCACTAAACCAGTTCATGATTTGTGGTGCAGTATCTGTTTCATTTGTAATTGGAAATGTACTCTCATGGAGGACTCTAGCTTTAATTGGCCTCATACCCACTGGTGTGTTGCTTTTGGGTCTTTTTATCATTCCAGAATCTCCTAGATGGCTGGCGAAGAGAGGGCGAGGAAAAGAATTCGAGGCAGCATTGCAGACGCTTCGAGGAAAAGATGCTGATATATCTCAAGAGGCAGATGAAATCCAGGATTACATAACAAGTTTAGAACAGCTCCCAAAACCAAAGCTGCTGGAATTGTTTCAGACAAGATATTTGCGCTCTGTCACAATTGGAATAGGGCTTATGGTATGCCAGCAATTTGGTGGAATCAATGGAATTTGTTTCTATCTCAGCAGTATTTTTGAGCTAGCAGGATTTTCTGCATTTGCTGGAACAGTAATATATGCTTGCCTTCAGATTGTGATCACTGGCCTTGGTGCAGCTCTGATAGATAAAGCTGGCAGGAAGCCCCTATTACTGATCTCTGGAACTGGATTAGTAGCTGGTTGTATATTTACAGCAGCTGCATTCTACCTTAAGGTTCATGAAGTGGGATTGGGGGCAGTCCCTGCACTTGCTTTCATTGGCATACTGGTCTATATAGGATCATTTTCACTTGGAATGGGAGCAGTGCCTTGGGTTGTCATGTCTGAGATATTTCCTATCAACATAAAAGGGCTGGCAGGGAGTGTAGCTACATTAGTAAACTGGTTTGGTGCTTGGTTATGCTCTTATACCTTCAACTTTCTCATGAGCTGGAGCTCCTATGGTACCTTTATTGTTTATGCTGCAATCAATGCAGTGGCCATAGTGTTTATAATTGTAGTGGTGCCAGAAACTAAGGGGAAAAGCCTTGAAGAATTACAAGCTGCCATTAATGCGTAG 1410 0.434 MGIKEDVEDGVEKNGIREPLISDHASNKGHPWMVYFTTLVAVCGSYEFGTCAGYSSPTQDAIRSDLGLSLAEYSLFGSILTFGAMIGAITAGPIADLIGRKGAMRVSSAFCVSGWLVIFFSEGPIPLDIGRLATGYGMGSFSYVVPVFIAEIAPKELRGALTALNQFMICGAVSVSFVIGNVLSWRTLALIGLIPTGVLLLGLFIIPESPRWLAKRGRGKEFEAALQTLRGKDADISQEADEIQDYITSLEQLPKPKLLELFQTRYLRSVTIGIGLMVCQQFGGINGICFYLSSIFELAGFSAFAGTVIYACLQIVITGLGAALIDKAGRKPLLLISGTGLVAGCIFTAAAFYLKVHEVGLGAVPALAFIGILVYIGSFSLGMGAVPWVVMSEIFPINIKGLAGSVATLVNWFGAWLCSYTFNFLMSWSSYGTFIVYAAINAVAIVFIIVVVPETKGKSLEELQAAINA* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0454 469 ProSitePatterns Sugar transport proteins signature 1. 321 338 IPR005829 GO:0016021|GO:0022857|GO:0055085
Amo06g0454 469 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 30 468 - -
Amo06g0454 469 ProSitePatterns Sugar transport proteins signature 1. 91 108 IPR005829 GO:0016021|GO:0022857|GO:0055085
Amo06g0454 469 TIGRFAM SP: MFS transporter, sugar porter (SP) family 26 462 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo06g0454 469 Pfam Sugar (and other) transporter 45 465 IPR005828 GO:0016021|GO:0022857|GO:0055085
Amo06g0454 469 PRINTS Sugar transporter signature 128 147 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo06g0454 469 PRINTS Sugar transporter signature 280 290 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo06g0454 469 PRINTS Sugar transporter signature 369 390 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo06g0454 469 PRINTS Sugar transporter signature 392 404 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo06g0454 469 ProSiteProfiles Major facilitator superfamily (MFS) profile. 33 456 IPR020846 GO:0022857
Amo06g0454 469 CDD MFS_GLUT6_8_Class3_like 35 462 IPR044775 GO:0008643|GO:0051119
Amo06g0454 469 Gene3D MFS general substrate transporter like domains 27 468 IPR036259 -
Amo06g0454 469 PANTHER - 30 468 - -
Amo06g0454 469 SUPERFAMILY MFS general substrate transporter 28 463 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0454 Amo-Chr6 6334071 6338215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0454 1 468 Organic Solute Cotransporters AT5G18840 58.664 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0454 K03444 - gmx:100785248 773.852