Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0415 ATGTCAAATTTCTCGTCMTGGTTCTCTCGCTTGCGCTCTTCTTCCAACTACTTCTATCGCACTATCCATAATATAACAACTCACTCGAATGCAACCAATGTGCTGACCTCACACCGCCCAAGGATGACGTGGACAGGTTCTGTGCTTCCTCTTGCGGTGGCTGTATGCGGTGCTTCATTTGCGCTTCATCCACACTTCAATCCTTCCTTGTGTGACGCCTCTGTTCCCTCTGATGCCATTAACAACAGCTTTGGGGGCAAAGGTAGCACCCAGTATGCCGTTAAGGGATCACACACAGAATTTCCGCACGAGCTTCTCCACGAGTTGAAACTCATCTGTCAGGATAACTTATCACTTGATTATGATGAAAGATACCACCATGGAAAACCACAAAACAGCTTTCATAAGGCTGTCAATATCCCCGATGTTATCGTTTATCCAAGATCTGAAGAGGAAGTTTCCAAGATTGTAAAATCATGTAATGACTATAAGGTTCCTATTGTACCTTATGGTGGAGCTACATCAATTGAGGGTCACACCTTATCACCTCACGGAGGGGTTTGCATTGACATGTCATCAATGAAAAGAGTGAAGGCATTACATGTTGATGACATGGATGTTGTTGTTGAGCCTGGAATTGGATGGATGGAACTTAATGAGTATTTGGAACCTTATGGTCTATTTTTTCCACTTGATCCGGGTCCTGGTGCAAGCATTGGAGGCATGTGTGCTACACGCTGCTCTGGGTCTTTAGCTGTGAGATATGGAACTATGCGTGATAATGTGATCAGTCTCAAGGTAGTTCTTGCCAATGGAGATATTGTGAAGACTGCATCTCGTGCTAGAAAGAGTGCTGCAGGGTATGACCTGACCCGTTTGGTGATTGGAAGTGAAGGAACACTTGGTGTTGTTACAGAAGTAACACTAAGACTTCAGAAAATTCCCCAGCATTCAGTGGTTGCCATGTGCAATTTCCCTTCTGTTAAGGATGCAGCAGATGTTGCTATTGCCACTATGATGTCTGGTATACAGGTGTCAAGAGTTGAGTTATTGGATGAAGTTCAGGTGAAAGCCATCAATGTTGCTAATGGGAAGAATTTCCTTGAATGTCCAACGTTAATGTTTGAATTTATAGGAACAGAGGCATATGCACGTGAGCAAACACAAATTGTTCGGGGAATTGTTTCTAAGCACAATGGATCAGACTTTGTATTCGCGGAAGAACCTGAAGCTAAAAAAGAACTTTGGAAGGTAAGGAAGGAGGCACTTTGGGCTTGTTTTGCAATGGAACCTAATATGGAGGCAATGATTTCGGATGTATGTGTTCCCTTATCTCACCTTGCTGATTTAATTTCAAGGTCAAAAAAGGAGTTGGATGCATCCCCACTGGTTTGCACAGTAATTGCTCATGCTGGGGACGGTAATTTCCACACGGTAATTCTCTTTGACCCTAGCCGAGAAGAACACCGGAAGGAGGCAGAGAGACTCAACAGCTTTATGGTTCATGCTGCTTTGTCATTGGAAGGAACTTGTACCGGTGAACACGGTGTTGGAACTGGGAAAATGAAGTACCTTGAAGAAGAACTGGGAGTGGAAGCATTAAGGACAATGAAGAAAATAAAACAAGTGTTAGATCCCAACAATATCATGAATCCTGGAAAGCTCATCCCTCCCCATGTTTGCTTGTAA 1689 0.4358 MSNFSSWFSRLRSSSNYFYRTIHNITTHSNATNVLTSHRPRMTWTGSVLPLAVAVCGASFALHPHFNPSLCDASVPSDAINNSFGGKGSTQYAVKGSHTEFPHELLHELKLICQDNLSLDYDERYHHGKPQNSFHKAVNIPDVIVYPRSEEEVSKIVKSCNDYKVPIVPYGGATSIEGHTLSPHGGVCIDMSSMKRVKALHVDDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLVIGSEGTLGVVTEVTLRLQKIPQHSVVAMCNFPSVKDAADVAIATMMSGIQVSRVELLDEVQVKAINVANGKNFLECPTLMFEFIGTEAYAREQTQIVRGIVSKHNGSDFVFAEEPEAKKELWKVRKEALWACFAMEPNMEAMISDVCVPLSHLADLISRSKKELDASPLVCTVIAHAGDGNFHTVILFDPSREEHRKEAERLNSFMVHAALSLEGTCTGEHGVGTGKMKYLEEELGVEALRTMKKIKQVLDPNNIMNPGKLIPPHVCL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0415 562 Gene3D - 103 334 IPR016169 -
Amo06g0415 562 Pfam FAD linked oxidases, C-terminal domain 314 555 IPR004113 GO:0003824|GO:0050660
Amo06g0415 562 Pfam FAD binding domain 141 277 IPR006094 GO:0050660
Amo06g0415 562 PANTHER D-LACTATE DEHYDROGENASE, MITOCHONDRIAL-RELATED 79 558 - -
Amo06g0415 562 SUPERFAMILY FAD-linked oxidases, C-terminal domain 318 558 IPR016164 GO:0003824|GO:0050660
Amo06g0415 562 ProSiteProfiles PCMH-type FAD-binding domain profile. 137 314 IPR016166 GO:0071949
Amo06g0415 562 SUPERFAMILY FAD-binding/transporter-associated domain-like 111 315 IPR036318 GO:0050660
Amo06g0415 562 Gene3D - 434 515 - -
Amo06g0415 562 PANTHER D-LACTATE DEHYDROGENASE 79 558 - -
Amo06g0415 562 Gene3D - 516 556 IPR016171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0415 Amo-Chr6 5560776 5567037 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0415 K00102 - gmx:100803612 946.806