Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo06g0413 | ATGGCAAAGACAAAGGCAAGTCGCACAGGAAAAGTTCCTGGTAAAAAAGGTGGTACTTCACATTCTCCAGACTCTGATAATCAGCATGTGGATGGTGATTGGATCATAGTGAAGAAGCAGATAGTCAATATTTTGGTGTCTGCCGCACCTTGTAGCAAAAGAAACTTAATGGCAAGCCCAGGACCAAAAGACATGCATCCTATGCCCCCTGAAACAGCAAGTAATCACATGCAACTACCCATGGAGACATCTACCGTGTATCCTTCAGGAAATGAACCTGAGAATACAAGTTTATTGACCGCCCCAAAGGAGATTTTGGATGTGAGAAGTGGTCCTCCTTCCATACCTAAAGCAACTTCAGTCAAGCAGCCAAGGGTTGTTAACAGAATCAATTCYCAAAATCCACATCAAGTGAGRCTGATGAAGTCACCTAAYTTACTGGGATTATCTAATACATCGAAAGCTATTAAGCAGCCTAGAACATTWCTTGCACCAAGAAGATCTTGCAATTTGGTAATTTCTTTAAATCAAGGGCTGAGAGCATCGAACCTTGAGAGAAAGCTTGAACGAGCTGGTGGGCTGACTCAGTGGCTGACATCACTTGGACTAGGCCAGTTTGTTAGAATTTTTCAGGGGAAGAGTCTCAACAAGTATCAGCTGGTAAATTTAACCATGAAGAAGCTCAAGGATATGGGTGCGAATGCGGTGGGCCCTCGCCGGAAGCTCATACATGCCATCGACTGTGTTTGTCAACCATACTGTTTTGAGGCGTTATAG | 777 | 0.4363 | MAKTKASRTGKVPGKKGGTSHSPDSDNQHVDGDWIIVKKQIVNILVSAAPCSKRNLMASPGPKDMHPMPPETASNHMQLPMETSTVYPSGNEPENTSLLTAPKEILDVRSGPPSIPKATSVKQPRVVNRINSQNPHQVRLMKSPNLLGLSNTSKAIKQPRTXLAPRRSCNLVISLNQGLRASNLERKLERAGGLTQWLTSLGLGQFVRIFQGKSLNKYQLVNLTMKKLKDMGANAVGPRRKLIHAIDCVCQPYCFEAL* | 259 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo06g0413 | 258 | PANTHER | F26K24.15 PROTEIN-RELATED | 2 | 257 | - | - | |
| Amo06g0413 | 258 | SUPERFAMILY | SAM/Pointed domain | 193 | 251 | IPR013761 | - | |
| Amo06g0413 | 258 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
| Amo06g0413 | 258 | PANTHER | SCP160 | 2 | 257 | - | - | |
| Amo06g0413 | 258 | MobiDBLite | consensus disorder prediction | 55 | 76 | - | - | |
| Amo06g0413 | 258 | ProSiteProfiles | SAM domain profile. | 194 | 252 | IPR001660 | GO:0005515 | |
| Amo06g0413 | 258 | Pfam | SAM domain (Sterile alpha motif) | 194 | 248 | IPR001660 | GO:0005515 | |
| Amo06g0413 | 258 | Gene3D | - | 185 | 251 | IPR013761 | - | |
| Amo06g0413 | 258 | CDD | SAM_superfamily | 194 | 248 | - | - | |
| Amo06g0413 | 258 | SMART | SAM_4 | 186 | 252 | IPR001660 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo06g0413 | Amo-Chr6 | 5554030 | 5556469 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo06g0413 | - | - | gmx:100804141 | 345.895 |