Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0342 ATGGATTATCTATGCTGTGATGACAACAAAGAAGGCACTGAGATGAAATCTTCTGATGCTTCTGATGATGTATTTGGAGATCCAGAAGATCATCCTCATGTTGGGGAGGAGCACCAAGCTGAAATTCCTGCATTCATCGCCGTGCCGTATCGCTCTCAGCTCATAAAGAAGACAATAGATTCAGAAACCAGAGTCAATAGGCCAGAGTCTTTCTCACTAGGATTACCTATTCCTCTGATGTGGTCACATTGCAAGTTAGAAAACAGTAATTGGGAGGCCTTAGAATCTATCACAAGCAAAGAGGGACAAATGATTTCGGAGAATGAATGTCCTAAGCTTAAAGTGGAATTTCAGACTATGTTTTCTAATTTTCAAATTCAATCCTCTGCAAAATCTGTTGAGTCAAGAGGAAAGTATCTTCTCCCTGGTTTGTTGGCTGCTCAATCTTGGACGAACACGGAATATGACAGTTTTCTTCTTGGCCTCTATATATTTGGAAAGAATCTCAGTCTTGTAAAGAGATTTGTTGGGACCAAAAACATGGGAGACATATTGTCTTTCTATTATGGAAAGTTTTATAGGTCTAAAGGGTATCGCCGATGGTCAGAGTGCCGGAAGTTGAGAAATAGGCGATGTATATACGGCCAGAAAATATTCACTGGATGGAGGCAACAAGAATTGCTGTCAAGAATGTTTTCCCATGTTGCAGGAGAATGCCAAACTTTGTTGATTGAGATTTCAAGGAAATTTCTGGAGGGAAAGATGCCATTTGAAGAATATGTATTTGATTTAAAGGATGCTGTTGGCATTGAATTGTTCATAGCTGCAGTAGGCATTGGTAAAGGGAAGCAAGATCTCACTGGCACTGCCAACGAGCCAACAAAGACTACAAATGTGTTCTCTGTTCGCGCCGAAATACCAGTTGGCAAAGCTTGCTCCTCTCTTACATCAGCTGACATAATCAAGTTTCTCACAGGAAATTTCAGGTTGAGCAAAGCTCGGTCCAATGATCTCTTCTGGGAAGCTGTTTGGCCGCGCCTTTTGGCGAAAGGGTGGCATTCTGAGCAGCCTAAGGATCAATTTGTCACCAGTTCAAAACCTTCCTTGGTTTTTCTTATACCTGGTGTTAAGAAATTTTCAAGAAGGAAACTGGTAAAAGGCAACCACTACTTCGATTCGATAAGTGATGTTTTGAATAAAGTAGCACTGGAGCCAGGGCTTATTGAGAATGAAATTCAAGCACCTGAGGGAAACTTGGATGAGGGAAACAAACAGTTTCGTTATCTTCAACCGCTAAGTTCAAAGTGCAATCAAGATCATGGGAAATTTACAGTTGTTGATACAAGCATTGTTGTTGATTCGCATCAATGTAAAGTGAGGCAGCTAAGAAGCTTACCTTTTCAAACTATGAGCATATCTGACATCTCAAGCAGTTCCATTGAATCTGAGCAAGATACTTCTGAAGAAGAAGTTGAACAAGGTAGTCCTCCAAATCATGTTGAACAAGCTGATTCTTCAAACCATGTSGATGATCAGGTTGAACAGGCTAATTCTTCAAAGCCTGTTGGAGAATTCTCTGCTACAGATATGAGCATAGATGCATTAGATTTATCTCTTACACTCGATGAGCGCAACACCACCACCTTAGAAGTAGAAAATCATAGATTTCATTCAGAGCAGCATGATGGAAACCATYCAAGGGAGATCAATGAGCATGAATTCATTCAAAATGCAGCATCTGATTGCTCAAATTGCTTTCCTAATGTCACSAAAATACAGAAGTTTGATTTGAATGAACCTGTTTCGCCATCAACTTTGCACGAAGCATCCGAGGGCGTGGTTTTGTCTATGGATTCAGACATCTTTTCTCACCCTTGTGAAGGYAGTGCCACTCAGCAGGATCCGGTTGTACAAGTTTCTGMAGAAAAATCTAAAACCATGATGTTGATTGACTTGAATTTTCCTCAAGTTTCACCAGAGTTTGGAATTGACATGGACATGGACATGGACATGGAAAGGGATGTTCCATCCTCTAATGTCATGSAGCAAAATCACAATCCATGTGAAAATACATCGTYGTCCTCTCCATCCGACACGGCGCAGCTCAATGCCATACAGGAGTCTCCTGATCATCATGATAAGGYGCAGCAATCCGGCATTGTMAGCCGTCGGACGAGCACTAGAAACCGACCATTGACCACAAAAGCATTGGAAGCTCTTGAGTACAGATTTCTCAACTCAAAGAGGAAGAGAAAGAGCACAGAATCTTCAGAGAGTAATTCTTCAAAGTCAAGATATATAGGTGCAAGTAATGGAACAATAGTTAGTGGTAATTGTGACAATGGCATTGTGACTTCCATGGCTGATACAAGAGCAGAGGAAGAGAATGTTATGGCATTAATCTGA 2406 0.409 MDYLCCDDNKEGTEMKSSDASDDVFGDPEDHPHVGEEHQAEIPAFIAVPYRSQLIKKTIDSETRVNRPESFSLGLPIPLMWSHCKLENSNWEALESITSKEGQMISENECPKLKVEFQTMFSNFQIQSSAKSVESRGKYLLPGLLAAQSWTNTEYDSFLLGLYIFGKNLSLVKRFVGTKNMGDILSFYYGKFYRSKGYRRWSECRKLRNRRCIYGQKIFTGWRQQELLSRMFSHVAGECQTLLIEISRKFLEGKMPFEEYVFDLKDAVGIELFIAAVGIGKGKQDLTGTANEPTKTTNVFSVRAEIPVGKACSSLTSADIIKFLTGNFRLSKARSNDLFWEAVWPRLLAKGWHSEQPKDQFVTSSKPSLVFLIPGVKKFSRRKLVKGNHYFDSISDVLNKVALEPGLIENEIQAPEGNLDEGNKQFRYLQPLSSKCNQDHGKFTVVDTSIVVDSHQCKVRQLRSLPFQTMSISDISSSSIESEQDTSEEEVEQGSPPNHVEQADSSNHVDDQVEQANSSKPVGEFSATDMSIDALDLSLTLDERNTTTLEVENHRFHSEQHDGNHXREINEHEFIQNAASDCSNCFPNVTKIQKFDLNEPVSPSTLHEASEGVVLSMDSDIFSHPCEGSATQQDPVVQVSXEKSKTMMLIDLNFPQVSPEFGIDMDMDMDMERDVPSSNVMXQNHNPCENTSXSSPSDTAQLNAIQESPDHHDKXQQSGIVSRRTSTRNRPLTTKALEALEYRFLNSKRKRKSTESSESNSSKSRYIGASNGTIVSGNCDNGIVTSMADTRAEEENVMALI* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0342 801 MobiDBLite consensus disorder prediction 498 525 - -
Amo06g0342 801 ProSiteProfiles SANT domain profile. 145 196 IPR017884 -
Amo06g0342 801 SUPERFAMILY Homeodomain-like 149 198 IPR009057 -
Amo06g0342 801 MobiDBLite consensus disorder prediction 750 772 - -
Amo06g0342 801 PANTHER ATROPHIN-RELATED 6 795 - -
Amo06g0342 801 MobiDBLite consensus disorder prediction 6 34 - -
Amo06g0342 801 MobiDBLite consensus disorder prediction 474 525 - -
Amo06g0342 801 MobiDBLite consensus disorder prediction 671 733 - -
Amo06g0342 801 Gene3D - 145 204 - -
Amo06g0342 801 MobiDBLite consensus disorder prediction 719 733 - -
Amo06g0342 801 PANTHER ARGININE-GLUTAMIC ACID DIPEPTIDE REPEAT PROTEIN 6 795 - -
Amo06g0342 801 MobiDBLite consensus disorder prediction 677 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0342 Amo-Chr6 4887469 4891862 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0342 - - aip:107645613 1525.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0866 16 13914163 13918542 Amo06g0342 06 4887469 4891862 hybridization