Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0295 ATGGCCAAGAAACCGCCACTCGTGCCGACGCATCTCCTCATCGGCCTCATCATCGCCGCCGTAGCTGTGGCGGGAGGCGGCTCCGGCGAAGGGGAGCTTGACTACAAGAAGCTATCGGGCATTATAATCCCAGGCTTCGCGTCCACTCAGCTTCGTGCGTGGTCCATCCTCGACTGCCCTTTCTCTCCCCTCGATTTCAACCCTCTCGATTTGGTCTGGCTCGACACCACCAAACTTCTTTCTGCTGTCAATTGCTGGCTTAAGTGCATGTTGCTTGATCCATACAATCAGACTGATCACCCTGATTGCAAGTCCCGCCCTGATAGTGGTCTTTCCGGCATTACAGAACTTGATCCAGAGCGAGACCTTTACTTTCATAAGCTCAAATTGACATTTGAAACTGCATATAAACTTCGTGGTGGCCCCTCATTGGTTTTTGCCCATTCATTGGGTAATCATGTCTTTCGTTATTTCTTGGAGTGGTTAAAACTAGAAATTGCACCAAAGCACTATATCCAATGGCTAGATCAACATATTCATGCCTATTTTGCTGTTGGAGCTCCCCTTCTTGGTGCAACTGAAACTGTTGAAGCAACACTTTCAGGATTCACATTTGGTCTTCCTATTTCAGAGGGAACAGCTCGATTGATGTTCAACTCCTTTTCTTCGTCATTGTGGATGATGCCCTTTTCCAAGTACTGTAGATCAAATAGTAACTATTGGAAGCATTTTTCTGGGGCAAGGCATGTAGGTAACCACACGTATCACTGTGAAGATAAGGAATTTCAGTCAAACTTCTCTGGATGGCCAACAAATTTAATCAACATTGAAATTCCTTCAACTCGTGGATTTGATGCATACCCTTCAATCACAGAAATACCTCAGTCTAATTTGTCTAGCATGGAATGCGGAATACCTACACAATTATCTTTTTCAGCTCGCGAAATGTCAGATGGAACCTTTTTCAAGGCAATTGAAGATTACGATCCAGACAGCAAGAGGCTGTCGTACCAGTTAGAAAAATCATATATCAATGATCCTGTTCTTAATCCTCTGACACCTTGGGACCGGCCACCAATAAAAAATGTCTTCTGCATTTATGGCACTGATTCAAAGACTAAGGTTGGTTACTACTTTGCACCTAGTGGCAAGCCTTACCCTGATAACTGGATAATTACGGATATCATTTATGAGTTTGAAGGTTCTCTATACTCAAGGTCAGGGAATCTGATTGAAGGGAATCCTGGAGCCACAAGTGGAGATGAGACGGTACCATACAACTCCCTTGCATGGTGCAAGAGCTGGCTTGGACCAAAGGTGAACATAACAAGAGCGCCTCAGTCTGAGCATGATGGTACAGATGTACAAATTGAGTTGAATGTAGAACATCACCATGATGAAGATGTTGTTGCAAACATGACAAGATCACCAAAGGTTAAGTACATAACATATTATGAAGATTCTGAGAGTCTTCCAGGAAAGAGGACAGCAGTTTGGGAACTTGATAAAGCAAATCACAGGAACATTGTGAGATCACCGGTGCTAATGCGAGAGTTATGGCTTGAGATGTGGCATGATGTCCATCCTGATGCAAAATCAAAATTTGTCACAAAAGCTAAGCGAGGACCCTTGAGGGATGATGACTGTTACTGGGATTATGGCAAAGCTCGCTGTGCCTGGGCAGAATATTGTGAATATAGGTATGTCTTTGGTGATGTTCACCTGGGACAAAGCTGTAGGTTGAAATCTACTTCAACTAACCAGTTGTTGAATTATTTGTAA 1782 0.4371 MAKKPPLVPTHLLIGLIIAAVAVAGGGSGEGELDYKKLSGIIIPGFASTQLRAWSILDCPFSPLDFNPLDLVWLDTTKLLSAVNCWLKCMLLDPYNQTDHPDCKSRPDSGLSGITELDPERDLYFHKLKLTFETAYKLRGGPSLVFAHSLGNHVFRYFLEWLKLEIAPKHYIQWLDQHIHAYFAVGAPLLGATETVEATLSGFTFGLPISEGTARLMFNSFSSSLWMMPFSKYCRSNSNYWKHFSGARHVGNHTYHCEDKEFQSNFSGWPTNLINIEIPSTRGFDAYPSITEIPQSNLSSMECGIPTQLSFSAREMSDGTFFKAIEDYDPDSKRLSYQLEKSYINDPVLNPLTPWDRPPIKNVFCIYGTDSKTKVGYYFAPSGKPYPDNWIITDIIYEFEGSLYSRSGNLIEGNPGATSGDETVPYNSLAWCKSWLGPKVNITRAPQSEHDGTDVQIELNVEHHHDEDVVANMTRSPKVKYITYYEDSESLPGKRTAVWELDKANHRNIVRSPVLMRELWLEMWHDVHPDAKSKFVTKAKRGPLRDDDCYWDYGKARCAWAEYCEYRYVFGDVHLGQSCRLKSTSTNQLLNYL* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0295 593 Pfam Lecithin:cholesterol acyltransferase 70 119 IPR003386 GO:0006629|GO:0008374
Amo06g0295 593 Pfam Lecithin:cholesterol acyltransferase 120 463 IPR003386 GO:0006629|GO:0008374
Amo06g0295 593 PANTHER BNAA09G50730D PROTEIN 27 119 - -
Amo06g0295 593 PANTHER BNAA09G50730D PROTEIN 120 576 - -
Amo06g0295 593 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 27 119 - -
Amo06g0295 593 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 120 576 - -
Amo06g0295 593 Gene3D alpha/beta hydrolase 109 250 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0295 Amo-Chr6 4353732 4362149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0295 10 593 Acyl Lipid Metabolism Gene Families AT1G04010 69.904 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0295 - - ahf:112695174 1206.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1499 16 27464946 27474151 Amo06g0295 06 4353732 4362149 hybridization