Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0294 ATGGAGAGTGGGAATAGGAAGAGAGCAGAGGAAGAAGAAGCAGGGCCATCATCATTGATCTCTACTGCTTTTAGGGTTGGTGAAAGCCACCAACAACAACTGAATCAAAAGCCAATAAGGGAAGTGGAAGAAGAACAAGCAGAGCAAGAAGAAGATGATGAACAAAGCTTTGGTGGTGATCACAAAAATTGTGGCTTTGTACCTGGTCCTTTACTTTCTCTCAAGGAGCAGATCGAACGGGACAAGGAGGACGAAAGCCTAAGAAGGTGGAAGGAGAAGCTGTTGGGTTGTTTGGAAAGCAATTTAGATGGCCAATTGGATCCTGAAGTGAAATTTCATTCCATTGGAATTCTCTCTGAGGATTTTGGTGAAATTGTTATCCCCTTACCTGTGGACGAAAATCGTAACGGCCGAAATCTATTCACTCTCAAGGAGGGATCTTGCTATCAGCTTAGGCTAAAATTTAGTGTTCTACACAACATTGTGTCTGGCTTGACATACTCCAACACTGTGTGGAAAGGAGGGCTTCAAGTTGATCAAAGCAAGGGAATGTTAGGGACTTTTGCTCCTCAAAAAGAACCATATGTCTATGCCTTGAAGGAGGACACCACTCCATCAGGTGCACTTGCAAGGGGTGTTTACTCTGCCAAACTTAAGTTTGAAGATGACGACAAAAGGTGTCACATGGAGCTCAAATATTTGTTCGAGATAAAAAAGAGAAGCTAG 726 0.4311 MESGNRKRAEEEEAGPSSLISTAFRVGESHQQQLNQKPIREVEEEQAEQEEDDEQSFGGDHKNCGFVPGPLLSLKEQIERDKEDESLRRWKEKLLGCLESNLDGQLDPEVKFHSIGILSEDFGEIVIPLPVDENRNGRNLFTLKEGSCYQLRLKFSVLHNIVSGLTYSNTVWKGGLQVDQSKGMLGTFAPQKEPYVYALKEDTTPSGALARGVYSAKLKFEDDDKRCHMELKYLFEIKKRS* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0294 241 PRINTS RHO protein GDP dissociation inhibitor signature 161 177 IPR000406 GO:0005094|GO:0005737
Amo06g0294 241 PRINTS RHO protein GDP dissociation inhibitor signature 178 193 IPR000406 GO:0005094|GO:0005737
Amo06g0294 241 PRINTS RHO protein GDP dissociation inhibitor signature 220 237 IPR000406 GO:0005094|GO:0005737
Amo06g0294 241 Gene3D Coagulation Factor XIII, subunit A, domain 1 62 241 IPR024792 -
Amo06g0294 241 MobiDBLite consensus disorder prediction 1 63 - -
Amo06g0294 241 SUPERFAMILY E set domains 48 240 IPR014756 -
Amo06g0294 241 Pfam RHO protein GDP dissociation inhibitor 49 239 IPR000406 GO:0005094|GO:0005737
Amo06g0294 241 MobiDBLite consensus disorder prediction 22 36 - -
Amo06g0294 241 PANTHER RHO GDP-DISSOCIATION INHIBITOR 8 240 IPR000406 GO:0005094|GO:0005737
Amo06g0294 241 PANTHER RHO GDP-DISSOCIATION INHIBITOR 1-LIKE 8 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0294 Amo-Chr6 4350410 4353477 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0294 K12462 - gmx:100810029 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1498 16 27461583 27464644 Amo06g0294 06 4350410 4353477 hybridization