Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0270 ATGGACAAGTTGAATCTTTCTCAACTGGGCGAGAAGCTCATGACGAGTGGGGCCCAAATGGGGCGAATCATGAGCGTCAAGATGAAGGAGGTGAAGGAGATGCTCCAGGCACCCACACCCGAATCCAAGATGGTCGAAGACGCCACCTCCGAAACCCTATCGGACCCTAATTGGGGCACTAACCTCAGGATCTGTGCCATGATCAACTCCGACCAACTCAACGGCTCTGAGGTTGTTAGGGCCATCAAGAGGAGACTCTCTCACAAGAACCCACTCGTTCACTCACTCACCCTTGACCTTCTCGAAGCCTCCGCCATGAACTGCGACAAAGTCTTCTCCGAGATCGCATCCGAGAAGCTTCTCGATGAAATGATCTCCAAGCTCCTTGATAACCCTCACGCTGATTCCAATGTTCGTCGGAGGGCGTTTCACCTCATTAGGGCTTGGGGCCAGTCTCAGGATCTCGCTTATCTCCCTGTCTTTCGTCAAACTTACATGAGTTTGCAAGAAAGGGCTGAATCAGTTGATGTAGGAGGAGGAAGTTCGCCCGGTGTTCCTCACAATTTAGGGTCTTATCTTCAGCAACAGGGATTAGACCCTCCTTCAAGCTACCCTGTTCCCGAAGCTGGACTAGTTTCTATGGATGACTTGACTTTTTCTTCCGGTCTCCAACACATGTCAGCTGAAGAGAAGAAAGAGCTTCTTGTAGTTGCACGAAACAGTCTTGAATTGCTATCTAGCATAATAAATTCTGAGGCAGAGCCCAAAACCTTGAAGGAAGATTTAACTCTCAGTTTGCTGGACAAGTGCAAGCACTCACTTTCTATCATGAAGGAAATTGCGGAAAGCACCACAGATGATGAAGAGACACTTTTTGAGGCTTTGTATCTTAATGATGAGCTGCAGCAGATAGTTTCCAAGTACGAGGAGTTGGAGGCTGCTCAACGGCCTGTGGCACAAGAGACTCCAAATGCTGACACTGCAAAGCATGATGCGGAAGCTGTTCAAAATCCTATTGAACTTCCTAAAAAATTTGAAGAGGATGAGTCCGAAGAGTTCGAAGCTGCTCAGGAACTTGAAAGAAAGCTTCCCAAAAAGTCCAACGGTGTTGAAGCCAATGCAACCAATGGGGATGGTCATCATGTTGAAACCACAATACTAGATAAGGCAGATGAGAAGGGCAACGCCGAATCTAGCCTCAAGAGCAATAGAGAGTGA 1218 0.4787 MDKLNLSQLGEKLMTSGAQMGRIMSVKMKEVKEMLQAPTPESKMVEDATSETLSDPNWGTNLRICAMINSDQLNGSEVVRAIKRRLSHKNPLVHSLTLDLLEASAMNCDKVFSEIASEKLLDEMISKLLDNPHADSNVRRRAFHLIRAWGQSQDLAYLPVFRQTYMSLQERAESVDVGGGSSPGVPHNLGSYLQQQGLDPPSSYPVPEAGLVSMDDLTFSSGLQHMSAEEKKELLVVARNSLELLSSIINSEAEPKTLKEDLTLSLLDKCKHSLSIMKEIAESTTDDEETLFEALYLNDELQQIVSKYEELEAAQRPVAQETPNADTAKHDAEAVQNPIELPKKFEEDESEEFEAAQELERKLPKKSNGVEANATNGDGHHVETTILDKADEKGNAESSLKSNRE* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0270 405 Gene3D - 229 325 IPR038425 -
Amo06g0270 405 Pfam GAT domain 239 312 IPR004152 GO:0035091|GO:0043130
Amo06g0270 405 ProSiteProfiles GAT domain profile. 226 313 IPR004152 GO:0035091|GO:0043130
Amo06g0270 405 Pfam VHS domain 42 152 IPR002014 GO:0035091|GO:0043130
Amo06g0270 405 PANTHER TOM1-LIKE PROTEIN 2 1 359 - -
Amo06g0270 405 MobiDBLite consensus disorder prediction 315 405 - -
Amo06g0270 405 SUPERFAMILY ENTH/VHS domain 37 170 IPR008942 -
Amo06g0270 405 PANTHER TOM1-LIKE PROTEIN 1 1 359 IPR044836 GO:0035091|GO:0043130|GO:0043328
Amo06g0270 405 MobiDBLite consensus disorder prediction 382 405 - -
Amo06g0270 405 CDD VHS 42 168 - -
Amo06g0270 405 Gene3D - 32 177 IPR008942 -
Amo06g0270 405 SMART VHS_2 41 172 IPR002014 GO:0035091|GO:0043130
Amo06g0270 405 ProSiteProfiles VHS domain profile. 48 176 IPR002014 GO:0035091|GO:0043130
Amo06g0270 405 MobiDBLite consensus disorder prediction 336 367 - -
Amo06g0270 405 SUPERFAMILY GAT-like domain 201 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0270 Amo-Chr6 3635444 3637643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0270 - - gmx:100803803 488.419