Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0091 ATGCAGAAACAAAGGTTGGAGGGTAAGGTGGCTCTAATCACGGGAGCAGCCAGTGGAATCGGAGAAGAAACGGTGAGACTCTTCGCCGAAAACGGAGCCTATATCGTCGTCGCCGATGTTCAAGACGATCTCGGTCATCAAGTCATAGCTTCAATAGGCTCCGATAGAATCACCTACCGTCACTGTGACGTGAGAGACGAGAATCAGGTTGAAGAGACCGTCAATTTCACCTTGGAAAAGTACGGCCGCATCGATATCCTCTTCAGCAACGCCGGTATACTTGGGTCCCTTTCCGGTATCCTCGACCTTGATCTCAAAGATTTCGATAACACCATTGCCATCAACGTTCGTGGAGTGGCAGCAACGATAAAGCACGCGGCACGCGCCATGGTTGCAAAGAAAATCCGCGGCTCCATCATATGCACGACGAGCGTGGCGGCCACGTTGGGCGGAACGGGTCCTCACAACTACACGACATCGAAGCACGCGCTCTTGGGGCTCGTGAGATCGACGTGCAGTGAACTTGGCGGTTATGGAATCAGAGTTAATAGTGTTTCGCCTTACGGAGTTGCAACGCCACTTTCATGTAAGCCGTTTAATCTTGGTCCTGATGAGGTAGAAGCTTCTACTTTGGAATATGGGAATCTGAAAGGGGTGGTGTTGAAGGCTCGGCATATTGCGGAGGCGGCGTTGTACCTTGCTTCAGATGAATCTGGTTACGTGAGTGGGCATAACTTGGTGGTTGATGGTGGATTCACGGTGGTTAATGGCAGCTTCTCTGCAAGTTATAATTTGTTCACGAATAGTTAG 810 0.5049 MQKQRLEGKVALITGAASGIGEETVRLFAENGAYIVVADVQDDLGHQVIASIGSDRITYRHCDVRDENQVEETVNFTLEKYGRIDILFSNAGILGSLSGILDLDLKDFDNTIAINVRGVAATIKHAARAMVAKKIRGSIICTTSVAATLGGTGPHNYTTSKHALLGLVRSTCSELGGYGIRVNSVSPYGVATPLSCKPFNLGPDEVEASTLEYGNLKGVVLKARHIAEAALYLASDESGYVSGHNLVVDGGFTVVNGSFSASYNLFTNS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0091 269 Pfam Enoyl-(Acyl carrier protein) reductase 15 253 - -
Amo06g0091 269 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B 1 261 - -
Amo06g0091 269 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Amo06g0091 269 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Amo06g0091 269 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Amo06g0091 269 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Amo06g0091 269 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Amo06g0091 269 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Amo06g0091 269 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Amo06g0091 269 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Amo06g0091 269 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
Amo06g0091 269 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 261 - -
Amo06g0091 269 Gene3D - 1 261 - -
Amo06g0091 269 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 255 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0091 Amo-Chr6 959326 960669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0091 6 254 Acyl Lipid Metabolism Gene Families AT3G55290 30.827 5.26e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0091 - - gmx:100811279 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0949 16 15178508 15180214 Amo06g0091 06 959326 960669 hybridization