Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0088 ATGCGACTATGGGGTCACAATCTTCAAGCTCTCCGTGTTGCATCTGGCACAATATTTAATGAGATTATTGTTTGGAAAGTGGCCCCTCAGCTTGATAAGTGTTCATCAAGCTTCGGAGAAGACAATGATCGTCAGAGCATTTCATTATGCAATTGCTGTATGTTCAAAGATCAACTTTATGGGGCTGTTCATGTATGTAAACTTATTGGACATGAAGGTTCAATCTTCCGAATAGCATGGTCGTCTTGTGGCTCTAAACTGGTATCTGTCTCTGATGACCGTAGTGCACGTGTCTGGGCAGTTCCTATTGAAGTGGAAGATTTTACGCGGCATGATCCCACTGCCCTTGTCTTATTCGGACATAATGCTCGAGTTTGGGATTGTTGCATTGCTGATCACTTGATTGTCACTGCCAGTGAGGATTGTACGTGTCGTCTATGGGGAGTTGATGGTGAACAACTGCAAGTCATTAAGGAGCACATAGGGAGGGGTATATGGAGATGTATGTATGACCCAAATTCGGCACTTCTCATAACGGCTGGGTTTGACTCAGCTATCAGAGTGCATCAGCCTCATGCTTCTGTATCCAGCGGATTGGCAGCAGCACCAGGCCCTCCTGACAGGGCAGAGACATTTTCCATTTGCATCCCTAATGTGTTGGATCGTATTGGACTCATGGACAGCAAGAGTGAATATGTACGTTGTTTACGTCTTGCCTCTCAGGACAGTCTTTATGTTGCCACAAATCATGGTTTTCTTTACCATGCTAAATTCATTGGTGCAAGAGGTGCTCAGTGGAAGCAACTTGTTCAGGTCAGCAATGGGGCTCAAATTATCTGTATGGATTTATTGTCTAAGGACTCAATTGAACTTGACTGCGGTGCTGACAATTGGGTTGCTATTGGAGATGGTAAAGGAAATATGACAGTTATTGGAGTTACTGATAATGGTTGTACTCCTACAGTGAGACTAAACTTCACCTGGTCAGCTGACATGGAGAGACGGCTCTTGGGTACCTATTGGTGCAAATCTCTGGGATGCAGGTATGTCTTCACAGCTGATCCTAGAGGAACATTGAAACTATGGAGGTTGCCTGATCCCCCACAATCTAGCCTCGCAGGCTCCATGAAGAGTAATAGTGCATCACATATAGCAGATTTCATATCAAATTTTGGAATGCGGCTAATGTGTTTGGATGCTTGCGTGGAAGGAGAGATCCTAGTGTGTGGAGATGTACGTGGTAATATGGTTGTGTTCCCTTTGCCAAAGAATCTGGTGCTTGGCACATCATTAGTACAAGAAGGGAAGATAACTCCGGCAAATCATTTCAAAGGGATTCATGGTATATCAAGTGTGTCTAGTGTTTCTGTGACTAAGCTTGGTCATAATCAGCTTGAGATAAGCTCAACCGGAGCAGACGGATGTATATGCTATCTAGAATATGATAGAGATATGCGTACTTTGCAATTCATGGGGTTGAAACAGGTGAAAGAGTTGAGTTTGATTGAAAATGTTTCTGCGAATAACAACTCTGTTGGTACATTATCTGGCGGTTATGCAGCTGGTTTTGCATCAGTTGATTTCATAGTGTGGAACTTAGTTAATGAGAGTAAGGTGGTGAAAATTCCATGCGGTGGATGGCGCCGTCCTCACTCCTACTATCTAGGTGATATACCAGAGAAGGAAAATTGCTTTGCCTTTGTCAAGGATGAAATGATACATATCCATAGACACTGGATTCATGATAAAGGTGAGAAGATATATCCTCAGAGGTTACATTTGCAATTTCATGGGAGAGAGATACATTCCTTGTGCTTTATCTCTGAAGATATACTCCCTGGAGATTCTTATAAGCATACCTTATTTTCTAAATTAAGTTGGATTGCAACTGGATGCGAGGATGGAACTGTGAGATTGACTTTGTACTCTCCAGATATTGAAAATTGGTCCATGTCAAAACTGCTTGGTGAACATGTTGGAGGATCAGCTGTAAGATCAATTAGTTGTGTGTCAAAACTGCATACCTTTTCACCAAGTACTACTGATGTACCCGGTGGAAATGGTGAACTGAATGCTGCTGTTGAGGGTGAAGATAATCTAACCTTACTCATATCTGTGGGTGCAAAGCGTGTGGTAACTTCTTGGCTACTGAAATATCAGAAGCAGAGTGACAAAAATGACCTTTTAATTGATCATCAGTATAATTCAAAAGGAGTTGATCAATTTTTGTCAAGCTTGCCCTCATCAATGACATTCCAGTGGCTTTCTACTGATATGCCAGCAAGATATTCGATTACCCAGAAATATCCGGAAAATGCTCCCGAGAATGTAGTAAGTGCTGCTGAACAAGTTTCTAATACAGAGGTTGATGGTAGACCTGGATCTCTGTTGAATGAAAGGGGAATGATGAACTCAATCAAAGATAAACATGAGGATGACTGGAGATATCTTGCTGTTACTGCTTTTCTTGTTAAATGTGTGGGTTCCAGGATATCTGTTTGTTTTGTTGTTGTTGCCTGTTCAGATGCTACACTTGTGTTACGGTCTTTAGTTTTGCCCTTCCGCCTATGGTTTGATGTTGCTTTGTTAGTTCCCTTACTAGCCCCAGTCTTGTCATTGCAGCATATAATTTTCCCCATATCTAGGCCTTTTAAAGAAAACACTCAATTTGGAAATGCTTATATTGCAATCAGTGGATCTACTGATGGGAGCATTGCTTTTTGGGACCTGACTGATAGTGTTGAAGCTTTTATGCAGAGGATTTCTGTTTGTAATGTAGAGAATTTCTTTGATTGTCAGAAACGCCCACAATCAGGGAGAGGAAGTCAGGGTGGTAGATGGTGGAGATCATTGAGCAGTGGTTTGTCAAAGAAAAGGCAGCCCAGTGATCAGGTAACCTCAAAAGCAAAAGATGAAACCAAAAGCATCTGTCATGCTGACACTGTTAGTGGTGACTCTTCAATAACAAATGGATCCGAAGACAGCAAAATGGGTTGTTCCCAAACCACGCAAACAGCTTTCCCTAAGTCGGAGATTAAAACTGATAATTCCTTGGTGGAAATATGTGAAATACAGCCTCTACGCCTTTTGCAAAATATTCATCAATCTGGAGTCAATTGTCTCCATGTTTCAGAGATAAAAGGTGGCCAAAACAACAATAGTTGCAATGTATATAGTATAGTTAGTGGTGGTGATGATCAGGCACTTCATCATCTTACCGTTGAACTATCACTTAAGTCAACAAATTCAGATAATGGGGTTGTGACTCCAGAAATAAGATATTGGACCTCTGGACCTGAATATGAGGACATAAGTTTTCAAAGTTGGAGCAAGAGTTATGGAATCAGGTTCTTAAATTATGTGAAAATTCCTTCGGCCCACAGCTCTTCAGTCAAAGGTGTGTGGACGGATGGGTCTTGGGTGTTTTCAACCGGACTTGATCAGCGAGTCAGATGCTGGCGACTTCATGACAGTAAACTCGTCGAGCATGCACATCTAATAGTTAGTGTACCAGAGCCAGAAGCATTATCTGCTAGAGCCTGTGTCAGGAACCATTATCAGATTGCTGTTGCTGGCAGAGGGATGCAAATAGTTGACTTTTCAGTATCATAA 3612 0.4189 MRLWGHNLQALRVASGTIFNEIIVWKVAPQLDKCSSSFGEDNDRQSISLCNCCMFKDQLYGAVHVCKLIGHEGSIFRIAWSSCGSKLVSVSDDRSARVWAVPIEVEDFTRHDPTALVLFGHNARVWDCCIADHLIVTASEDCTCRLWGVDGEQLQVIKEHIGRGIWRCMYDPNSALLITAGFDSAIRVHQPHASVSSGLAAAPGPPDRAETFSICIPNVLDRIGLMDSKSEYVRCLRLASQDSLYVATNHGFLYHAKFIGARGAQWKQLVQVSNGAQIICMDLLSKDSIELDCGADNWVAIGDGKGNMTVIGVTDNGCTPTVRLNFTWSADMERRLLGTYWCKSLGCRYVFTADPRGTLKLWRLPDPPQSSLAGSMKSNSASHIADFISNFGMRLMCLDACVEGEILVCGDVRGNMVVFPLPKNLVLGTSLVQEGKITPANHFKGIHGISSVSSVSVTKLGHNQLEISSTGADGCICYLEYDRDMRTLQFMGLKQVKELSLIENVSANNNSVGTLSGGYAAGFASVDFIVWNLVNESKVVKIPCGGWRRPHSYYLGDIPEKENCFAFVKDEMIHIHRHWIHDKGEKIYPQRLHLQFHGREIHSLCFISEDILPGDSYKHTLFSKLSWIATGCEDGTVRLTLYSPDIENWSMSKLLGEHVGGSAVRSISCVSKLHTFSPSTTDVPGGNGELNAAVEGEDNLTLLISVGAKRVVTSWLLKYQKQSDKNDLLIDHQYNSKGVDQFLSSLPSSMTFQWLSTDMPARYSITQKYPENAPENVVSAAEQVSNTEVDGRPGSLLNERGMMNSIKDKHEDDWRYLAVTAFLVKCVGSRISVCFVVVACSDATLVLRSLVLPFRLWFDVALLVPLLAPVLSLQHIIFPISRPFKENTQFGNAYIAISGSTDGSIAFWDLTDSVEAFMQRISVCNVENFFDCQKRPQSGRGSQGGRWWRSLSSGLSKKRQPSDQVTSKAKDETKSICHADTVSGDSSITNGSEDSKMGCSQTTQTAFPKSEIKTDNSLVEICEIQPLRLLQNIHQSGVNCLHVSEIKGGQNNNSCNVYSIVSGGDDQALHHLTVELSLKSTNSDNGVVTPEIRYWTSGPEYEDISFQSWSKSYGIRFLNYVKIPSAHSSSVKGVWTDGSWVFSTGLDQRVRCWRLHDSKLVEHAHLIVSVPEPEALSARACVRNHYQIAVAGRGMQIVDFSVS* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0088 1203 SUPERFAMILY WD40 repeat-like 13 656 IPR036322 GO:0005515
Amo06g0088 1203 SUPERFAMILY WD40 repeat-like 346 671 IPR036322 GO:0005515
Amo06g0088 1203 Gene3D - 268 727 IPR015943 GO:0005515
Amo06g0088 1203 Gene3D - 884 1170 IPR015943 GO:0005515
Amo06g0088 1203 MobiDBLite consensus disorder prediction 952 972 - -
Amo06g0088 1203 Gene3D - 9 250 IPR015943 GO:0005515
Amo06g0088 1203 SUPERFAMILY WD40 repeat-like 896 1161 IPR036322 GO:0005515
Amo06g0088 1203 SMART WD40_4 61 100 IPR001680 GO:0005515
Amo06g0088 1203 SMART WD40_4 321 363 IPR001680 GO:0005515
Amo06g0088 1203 SMART WD40_4 1023 1073 IPR001680 GO:0005515
Amo06g0088 1203 SMART WD40_4 111 148 IPR001680 GO:0005515
Amo06g0088 1203 SMART WD40_4 587 641 IPR001680 GO:0005515
Amo06g0088 1203 SMART WD40_4 150 190 IPR001680 GO:0005515
Amo06g0088 1203 SMART WD40_4 1117 1154 IPR001680 GO:0005515
Amo06g0088 1203 Pfam WD domain, G-beta repeat 66 99 IPR001680 GO:0005515
Amo06g0088 1203 ProSiteProfiles Trp-Asp (WD) repeats profile. 68 99 IPR001680 GO:0005515
Amo06g0088 1203 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 68 99 - -
Amo06g0088 1203 PANTHER WD REPEAT PROTEIN 1 1202 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0088 K24737 - gmx:100780968 1800.02