Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0061 ATGGACTCAGCGGAGGAGCGAGCAGTGAGAGATTTCATCGCAAAGGAAGTCCCCGACTGGAACGACGACGTCGTTTCGGTGGCGAGGTTCAAAGCATTCTCCGGCCAGAGATCCGATTGGCAGCCCAGGTTCCTCTTCTGGAGACACTTGATCCTCAAAGTCGCCACTCACTTTCGCCTCCTCTTCATAAAACCCTCCCAGGTTAAGAGTGTTTGGTTTAATCGAGGAGGGTTAACCCCCTTATGTCTTGACCACGTTCTGTCTCTAATGTATAATGAAGGTGACCTCACAAGAATTGTGGATCTTGCGGATCCAACAAGTGGACGATTGTCCCAACTATTCAGAAAAGTTAGCAACTTAGTAGCAAGATCAACTCCGGATATTATGTCTGAAGAATTTGTCATTTTAACTTCTCTGCTTCAGAGTAAGGCTGCTGAAGTTGTCAAACATCTATCTGAAAGTCACTGGAATTCATCATGTATCATCACAATGAAGAAATTCCAGGACATATGTGGAGGGCCTGATGAAGCATCTGCAATCTTGAGGTATATGTCAGGATGTGGTACAGCAAAGTATCTTAAAGTCCATAAGAAAGAATTTGTAGAGGGTGTAAAAATTTCTCCTTCAGCTTCCACATTATCTAGCATATCTAATTTAGACTATGATGTCTTGTACTTGATCTGGACAACTGAGAGGCTTCAGCAGCAACTAGACATGATTGACAGACGTTATGAGTCGTCAAGAAAGTCAGCGTTGGCTTCTCTACATTCAGGGAACAAAAAATTGGCCCTTAGACATGCAAGGGAGCTTAAGCTGGCCACTCAGAGTAGAGATAAGTGTTCATCACTTTTGAACAGAGTAGAGGAAGTACTTGGTGTCATTGCAGATGCGGAGGCTACCAAAAAGATATCTGAAGCTATGCAGATTGGAGCCAATGCAATTAAAGAAAATAAGATTAGCGTGGAAGAGGTTGATCTCTGTTTACGAGATCTCCAAGAGAGCATTGATGCACAGAAGGAAGTGGAAAAGGCGCTAGAACAAACTCCATCTTACACGGATGTCGAAGATGAAGATATCCAAGACGAATTGGAGAAGTTGGAGTTGGCTATTGAGAAAGAGGCTCCAGTTCCTGCAGTCGAAAAGGCGTTTGGCACCACAGAAGAAGGAAGAGCAGCTGCAGAAGCCACTGAATTTATCAATGAGGCTTTCTCAAATCTCAGGCTGTCAAATGGTGCATCTGTGAAGCAAGGTATCACTAAGGAGGGATCAGAGGGTGACAGAGAATCAAAAAAATTAGAAATGGAGGCTGTGTAA 1314 0.4376 MDSAEERAVRDFIAKEVPDWNDDVVSVARFKAFSGQRSDWQPRFLFWRHLILKVATHFRLLFIKPSQVKSVWFNRGGLTPLCLDHVLSLMYNEGDLTRIVDLADPTSGRLSQLFRKVSNLVARSTPDIMSEEFVILTSLLQSKAAEVVKHLSESHWNSSCIITMKKFQDICGGPDEASAILRYMSGCGTAKYLKVHKKEFVEGVKISPSASTLSSISNLDYDVLYLIWTTERLQQQLDMIDRRYESSRKSALASLHSGNKKLALRHARELKLATQSRDKCSSLLNRVEEVLGVIADAEATKKISEAMQIGANAIKENKISVEEVDLCLRDLQESIDAQKEVEKALEQTPSYTDVEDEDIQDELEKLELAIEKEAPVPAVEKAFGTTEEGRAAAEATEFINEAFSNLRLSNGASVKQGITKEGSEGDRESKKLEMEAV* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0061 437 Pfam Snf7 229 374 IPR005024 GO:0007034
Amo06g0061 437 PANTHER SNF7 FAMILY PROTEIN 105 409 - -
Amo06g0061 437 MobiDBLite consensus disorder prediction 414 437 - -
Amo06g0061 437 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 105 409 IPR005024 GO:0007034
Amo06g0061 437 Coils Coil 328 348 - -
Amo06g0061 437 MobiDBLite consensus disorder prediction 420 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0061 Amo-Chr6 671028 674599 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0061 K15053 - gmx:100783674 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0976 16 15720166 15723856 Amo06g0061 06 671028 674599 hybridization