Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0037 ATGCTGCGGCTGAAAGCCTTCCGGCCTTCCACTGACAAAATCGTTAAGATCCAGTTGCATCCGACGCATCCATGGATGGTAACCGCCGATGATTCAGATCGAGTCTCCGTTTGGAATTGGGAACACCGTCAGGTGATATATGAGCTGAAAGCTGGTGGAGTGGACGAGCGACGTTTGGTCGGCGCGAAATTGGAGAAGCTTGCAGAGGGAGAGACAGAGTCTAAAGGGAAACCTACAGAAGCCATTCGAGGAGGAAGTGTAAAGCAGGTGAATTTTTATGATGACGATGTACGCTTTTGGCAACTTTGGCATAATCGATCGGCAGCTGCAGAGGCGCCTACAGCTGTCCATCATCTCAGTTCAGCTTTAAGTTCTCCTGCCCCAACTACAAAAGGAAGGCATTTTCTTGTCATATGTTGTTTAAACAAAGCTATTTTTTTGGACTTGGTGACAATGCGTGGTCGTGATGTACCAAAGCAAGAGCTTGATAACAAGTCACTTCTCTGCATGGAGTTCCTTTATAGATCTGGTGTTGGTGATGGTCCTCTTGTTGCTTTTGGTGCATCTGATGGTGTCATTAGAGTTCTCTCAATGATCACATGGAAGCTTGTGCGAAGGTACACTGGTGGTCATAAAGGATCAATCTCTTGCTTAATGTCCTTCATGGCTGCTTCTGGTGAGGCTCTTTTGGTCTCAGGAGCCAGTGATGGATTGCTCATAATTTGGAGTGCTGACCAAGGGCCAGATTCACGGGAACTTGTGCCCAAGCTGAGCTTAAAAGCACATGATGGTGGGGTTGTTGCTGTTGAGCTGTCTAGGGTGATGGGAGGTGCTCCTCAGCTAATTACAATTGGTGCGGATAAGACATTAGCTATATGGGACACAGTCTCCTTTAAGGAGCTGCGGCGCATAAAGCCAGTCCCAAAGTTGGCTTGCCACAGCGTGGCTTCATGGTGTCATCCCCGAGCTCCAAACCTTGATATTCTAACCTGTGCTAAAGATTCTCACATATGGGCAATTGAACATCCCACTTATTCTGCTCTCACAAGGCCATTGTGCGAATTGTCAACAGTTATTCCTCCACAAGTTCTTGCTCCTAATAAGAAACTGAGGGTGTATTGTATGGTTGCACACACCTTGCAGCCACATCTTGTTGCTACTGGAACCAATATTGGTGTTATTATCTGCGAGTTTGACCCTAGATCTCTTCCACCTGTAGCTCCGCTACCAACCCCATCAGACAGCAGAGAACATTCTGCTGTATTTGTAGTTGAAAGGGAACTAAAGCTATTAAATTTCCAGTTAAACAACTCAGCAAATCCATCTCTTGGAAATAATAGCTCCTTGTCAGAAACTGGAAGATCAAAGGGAGATTTTTTTGAACCATTGCCTGTCAAGCAGGGGAAGAAGCACATTAGTACACCTGTTCCACATGATTCATACTCTGTGCTTTCTGTGAGCAGTTCAGGGAAGTATGTTGCAATTGTTTGGCCAGATATTCCTTACTTCTCTGTATACATGGCTAGTGATTGGTCAATTGTTGACTCTGGAACTGCAAGGCTTCTTGCTTGGGATACATGCCGTGACAGATTTGCTATATTGGAATCAGCAATTCCCCCAAGACTTCCTGTTCTTCCCAAGGGTACTTCATCAAAAAGAGCAAGAGAGGCAGCTGCAGCACAAGCAGCAGCTGCTGCTGCCGCAGCAGCTTCCTCAGCTTCTGTTCAAGTCCGCATCTTATTAGATGATGGAACATCAAATATACTAATGAGATCTGTTGGTACACGCAGTGAACCGGTGATTGGTTTGCATGGAGGGGCACTGCTTGGAGTTGCCTATCGGTCATCTAGGAGAGTCAGTCCTATTGCTGCCACAGCTATTTCAACAATCCAGTCTATGCCTTTATCTGGTTATGGAAGTAGTGGTGTTTCTTCATTTTCTACTTATGATGATGGATTTTCTTCATACAGATCTCCAGCTGAGGCAGCACCTCAAAACTTCCAGCTATACAGTTGGGAGACATTCCAGCCTGTGGGCGGTTTACTTCCCCAGCCAGAATGGACTGCTTGGGACCAAACTGTTGAATACTGTGCATTTGCATATCAGCAATACATAGTCATCTCTTGTTTGCGCCCTCAATATAGATACCTGGGAGATGTTGCAATCCCATATGCTACTGGTGGCGTTTGGCACCGCAGGCAATTGTTTGTGGCTACACCAACTACTATAGAAGTTGTWTTTGTAGATGCTGGGGTTGCACAAATTGACATTGAAACAAAGAAGATGAAGGAAGAGCAGAAAATGAAAGAAGCACAGGCAAGAGCAGTAGCTGAGCATGGAGAGTTAGCACTAATTACAGTAGATGGTCCCCAAGCTACTACAGAAGAAAGAATATCATTGAGGCCACCAATGTTGCAGGTAGTACGATTGGCTTCATTTCAGCATGCTCCTTCAGTGCCACCTTTCTTATCATTGCCAAAACAATCTAGAGTTGACACCGATGACTCTTGGATGGGAAGGGAAGCAGAAGAGAGAAAGGCTAGTGAGGTGGCTGTTGGTGGTGGGGGTGTCTCTGTGGCAGTAACTCGTTTTCCGATGGAGCAGAAACGCCCGATTGGACCTCTTGTTGTGGTAGGCGTCAGAGATGGAGTTCTTTGGCTAATTGACAGGTACATGTTCGCTCATGCCTTATCCTTGAGTCATCCTGGTATTCGATGCCGATGTCTTGCTGCTTATGGCGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGGCTTGGGAGAGAACATCATGATGATTTAGCACAATTTTTGCTAGGAATGGGCTATGCCAATGAAGCACTTCATTTACCTGGAATATCCAAGAGGTTGGAGTTCGATTTGGCAATGAAGAGCAATGATTTGAAGAGAGCTCTCCAGTGTCTTCTTACCATGAGTAACAGCAGGAATATAGGAAATGATACTACTGGTCTTGGTTTGAATGACATTCTTAATTTGTCTGACAAGAAACAAGATGTCGTTGAAGGTGTTCAGGGTATAGTGAAATTTGCAAGAGAGTTCTTGGATCTTATTGATGCTGCAGATGCTACTGCACAGGGTGAAATTGCTCGTGAAGCTCTCAAGAGGCTAGCTGCAGCTGCTTCAGTGAAAGGTGCTTTACAAGGTCATGAGTTGAGAGGAATGGCATTACGCCTTGCAAATCATGGGGAATTGACTCGGCTAAGTGGTTTGGTAAACAACTTAATCACACTTGGCTTGGGACGGGAAGCTGCATTTGCTGCTGCTGTTTTGGGAGACAATGCTCTAATGGAGAAAGCATGGCAGGATACTGGCATGCTGGCTGAGGCCGTGCTACATGCTCATGCACACGGACGTCCAACGTTGAAGAACTTGGTTCAGGCCTGGAACCAAATGCTACAAAGAGAGGTTGAGCCTACCCCGTCACAGAAGACAGATGCTACAGCTGCATTTTTAGCTTCTCTTGAGGAGCCTAAGCTTACAAGTTTGAAGGAAGCAGGGAAGAAACCACCCATCGAAATCCTACCTCCAGGGATGATGTCTCTTGATGCTCCTATATCAATCCAGAAAAAACCAGCTGCTGCTGCTGCCCAGAATTCATTAACACCACCGGGAAAGCCATTGGCACTCGAAGCACCTCCCACAACCACAGCAACGCCAGAGGGTGCTACGCAGCAGCCTGATTCCACACAGCAGCCTGATTCCACTAAGCAATCTGAATCCACACAGCAATCTGAGGCGACACCTCCTGCCCCAGTTAGTGATCAACCTCCATCAGAATCTACATCAGAATCCACGCCAGCTCCAGAGGCCACTCCACCTGAGCCAGAGTCAGGTGAAACCAAGGTCGATAATGTAGCTCCTACCGCTGCGCCAGTCTCTGCCACAAATGCAACTGCTAGTGGGGAAACTGCTCAAGCCACACCTCCGAGCAATCCAGCACCACCAGAGGCACCATCACCGGTAGCAGAGGTACCATCACCACTAGCAGAGGCTCCTGAGACAAATGTTTCTACTACAGGACCTGTGAATGATCCATTCTTGTGA 4062 0.4673 MLRLKAFRPSTDKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETESKGKPTEAIRGGSVKQVNFYDDDVRFWQLWHNRSAAAEAPTAVHHLSSALSSPAPTTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRSGVGDGPLVAFGASDGVIRVLSMITWKLVRRYTGGHKGSISCLMSFMAASGEALLVSGASDGLLIIWSADQGPDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCAKDSHIWAIEHPTYSALTRPLCELSTVIPPQVLAPNKKLRVYCMVAHTLQPHLVATGTNIGVIICEFDPRSLPPVAPLPTPSDSREHSAVFVVERELKLLNFQLNNSANPSLGNNSSLSETGRSKGDFFEPLPVKQGKKHISTPVPHDSYSVLSVSSSGKYVAIVWPDIPYFSVYMASDWSIVDSGTARLLAWDTCRDRFAILESAIPPRLPVLPKGTSSKRAREAAAAQAAAAAAAAASSASVQVRILLDDGTSNILMRSVGTRSEPVIGLHGGALLGVAYRSSRRVSPIAATAISTIQSMPLSGYGSSGVSSFSTYDDGFSSYRSPAEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDQTVEYCAFAYQQYIVISCLRPQYRYLGDVAIPYATGGVWHRRQLFVATPTTIEVVFVDAGVAQIDIETKKMKEEQKMKEAQARAVAEHGELALITVDGPQATTEERISLRPPMLQVVRLASFQHAPSVPPFLSLPKQSRVDTDDSWMGREAEERKASEVAVGGGGVSVAVTRFPMEQKRPIGPLVVVGVRDGVLWLIDRYMFAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFLLGMGYANEALHLPGISKRLEFDLAMKSNDLKRALQCLLTMSNSRNIGNDTTGLGLNDILNLSDKKQDVVEGVQGIVKFAREFLDLIDAADATAQGEIAREALKRLAAAASVKGALQGHELRGMALRLANHGELTRLSGLVNNLITLGLGREAAFAAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQMLQREVEPTPSQKTDATAAFLASLEEPKLTSLKEAGKKPPIEILPPGMMSLDAPISIQKKPAAAAAQNSLTPPGKPLALEAPPTTTATPEGATQQPDSTQQPDSTKQSESTQQSEATPPAPVSDQPPSESTSESTPAPEATPPEPESGETKVDNVAPTAAPVSATNATASGETAQATPPSNPAPPEAPSPVAEVPSPLAEAPETNVSTTGPVNDPFL* 1354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0037 1353 MobiDBLite consensus disorder prediction 1222 1255 - -
Amo06g0037 1353 PANTHER TSET COMPLEX MEMBER TSTF 1 1183 - -
Amo06g0037 1353 Gene3D - 3 427 IPR015943 GO:0005515
Amo06g0037 1353 SUPERFAMILY WD40 repeat-like 7 413 IPR036322 GO:0005515
Amo06g0037 1353 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 303 IPR001680 GO:0005515
Amo06g0037 1353 MobiDBLite consensus disorder prediction 1295 1313 - -
Amo06g0037 1353 Gene3D - 907 1155 - -
Amo06g0037 1353 MobiDBLite consensus disorder prediction 1337 1353 - -
Amo06g0037 1353 MobiDBLite consensus disorder prediction 1314 1328 - -
Amo06g0037 1353 SMART WD40_4 1 39 IPR001680 GO:0005515
Amo06g0037 1353 SMART WD40_4 252 294 IPR001680 GO:0005515
Amo06g0037 1353 SMART WD40_4 200 243 IPR001680 GO:0005515
Amo06g0037 1353 Coils Coil 754 774 - -
Amo06g0037 1353 MobiDBLite consensus disorder prediction 1196 1353 - -
Amo06g0037 1353 PANTHER TSET COMPLEX MEMBER TSTF 1 1183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0037 Amo-Chr6 379999 390456 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0037 - - gmx:100786844 2207.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0750 16 11948480 11958979 Amo06g0037 06 379999 390456 hybridization