Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2607 ATGGGAAAGATTGGATTATTCAATCTTGAAGACCAGTTTGCTTTCTATGGAGCATACCATAACAACCCAGTTAACATAGCAATCCACGAGTTCTTTGTTTGGCCAATATTCTTCACAGCACTTGTCATTCTCTACTTCATCCCCCCCTTCTTCAATCTCCCAAACCTTGAGTTTTCTCTATGGCAGAGCCATGTGGTTTTGGTTTGGAATGTAGGCTTCATTGTTGCTCTGATCTACGCTGCTTATTATGTAATCTTGGATCCTAAAGCTGGTTCCTTGGGTGCTTTGCTTTGTGCTCTGTGTTGGGTTGTTAGCAGTTTTGTTGCAAGACCACTTGGCTTCTCTCTGGCTTGGAAGGTTGTCCTGGTGGCTCAGGTTGTATGTTGGACGGCGCAGTTCATTGGCCATGGAGTATTTGAGAAACGGGCACCTGCTCTTTTTGATAACCTCGCTCAGGCCCTTGTAATGGCTCCTTTCTTTGTGTTGCTGGAGGCTCTCCAAACTTTATTTGGTTATGAACCGTACCCTGGATTTCAAGCAAGTGTGCAAGCAAAAATAGAAGCTAACATCAAAGAATGGAAAGAAAAACATCATAAACTAATAATGTCTTAG 612 0.4297 MGKIGLFNLEDQFAFYGAYHNNPVNIAIHEFFVWPIFFTALVILYFIPPFFNLPNLEFSLWQSHVVLVWNVGFIVALIYAAYYVILDPKAGSLGALLCALCWVVSSFVARPLGFSLAWKVVLVAQVVCWTAQFIGHGVFEKRAPALFDNLAQALVMAPFFVLLEALQTLFGYEPYPGFQASVQAKIEANIKEWKEKHHKLIMS* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2607 203 PANTHER DUF962 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_8G05310) 1 201 IPR009305 -
Amo05g2607 203 Pfam 2-hydroxy-palmitic acid dioxygenase Mpo1-like 8 168 IPR009305 -
Amo05g2607 203 PANTHER YGL010W-LIKE PROTEIN 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2607 Amo-Chr5 59680669 59683910 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2607 - - jre:109017853 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2607 05 59680669 59683910 Amo15g0771 15 53257732 53260943 hybridization