Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2463 ATGACCGATGTGATTCCAATGGCGAAGAAGGTTTACCCTGCGGCAGAGGCCTCATGTTCTGGAAAATACACAGTTTGGATGAAATCGCTTGTGTTCCACTCTAACGGCTGCACTGTGTATGATTCAAATGGTGACATCGTTTACCGCGTTGATAACTATGACAAAAAGGGAGCAACTCAAGTTAACCTTATGGATCTACGAGGCACACTTGTCTGTTCCATTCACAAGAAATTACTTGCTTTTGGACGATGGGATGTTTATAGATGCAACGGTTCTGATTCCGATTGTACAAGGCAGCAGCAGAAAACGAAGAAGAAGCCATGGTTTGAAGTGAAAACAAGTTATAAGATGATGATTACGGGAAGAGTAGCCAGTTGCCAAGTCACTACTATAGGCTGCCAAAAATATTGCATACACAGAATCTGTAGCAAAACATCAGGGTTTATGATCTTCAATATGAAGAACGGACACATAGTCGCAAATGCAAAGCAAAAGCAGACATGTTCAGGGATATTACTGGGGAAGGATGTTCTAAGGTTGGATGTGGAGGGAGACATAGATCACTCTCTTATAATGGCCTTTGTCACTGTATTTGCTCTAGTCTGCGGCACAATCTAA 618 0.4223 MTDVIPMAKKVYPAAEASCSGKYTVWMKSLVFHSNGCTVYDSNGDIVYRVDNYDKKGATQVNLMDLRGTLVCSIHKKLLAFGRWDVYRCNGSDSDCTRQQQKTKKKPWFEVKTSYKMMITGRVASCQVTTIGCQKYCIHRICSKTSGFMIFNMKNGHIVANAKQKQTCSGILLGKDVLRLDVEGDIDHSLIMAFVTVFALVCGTI* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2463 205 Pfam LURP-one-related 23 197 IPR007612 -
Amo05g2463 205 PANTHER - 14 202 IPR007612 -
Amo05g2463 205 Gene3D - 17 204 IPR038595 -
Amo05g2463 205 SUPERFAMILY Tubby C-terminal domain-like 21 201 IPR025659 -
Amo05g2463 205 PANTHER PROTEIN LURP-ONE-RELATED 4 14 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2463 Amo-Chr5 52212594 52213401 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2463 - - aip:107643065 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2463 05 52212594 52213401 Amo13g3523 13 119481846 119482770 PCT