Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2374 ATGGATGATGGTCCTGGCAAAATAAACTTCATTCCTGATTACTTCCAAGTTCCAGCATCAGTTGCAAAATCCCCTGAGAACAGAACACCATTGATTACTGAACCTGGAACCAATAAATATTTGAGGTCCCGGCAGCATCTGTGGGGTCAGAGAACAATGAGGGCTGCTTCTATGTTGAGATTGTTTAGTCTGCGTGGGCTGCCATGGCTTGGTAATGGGGGTCAGGAAAAGGTTGAGCTAACAGCTGCAGAAGTAGAGTCACTTCGATCAGAACTTGCCGATATGGAAGAGAGAGAAGCTCAATTGAAAGCTCAGTTGGAAAATATCGATGAAATTTTGCGGTCATCTCGTCTTTCTGGATATTTGTACATTCGAAGTAGGTGGGCAACACTACCAGGAGAACCTCCACCTATAGATGACACAGACATAGATGATTGGCTTCCTCGSTTCATTGTTCTCCATGGTGCATGTCTGTATTTATATATGTTGTGTACAGATCTAAGTCCATTGGACTCCACGCTTCTGTCTGATATTGTTGAAGTAGGCGCTTTACCCAGTTTCAAGTGTGAAGATGATGAAATGCGATATGCCTTTTATATTTTAACTCCTCATGGATTACGTTATGAGTGTTCAAGCAATTCTAAGATAAAGGTAGACGCATGGTTATCAGCTTTACAAGCTGAGTGCAAATTGGATTGTGGCGCAACAGCTCCCAATGGTTCAGTTTAG 729 0.4266 MDDGPGKINFIPDYFQVPASVAKSPENRTPLITEPGTNKYLRSRQHLWGQRTMRAASMLRLFSLRGLPWLGNGGQEKVELTAAEVESLRSELADMEEREAQLKAQLENIDEILRSSRLSGYLYIRSRWATLPGEPPPIDDTDIDDWLPRFIVLHGACLYLYMLCTDLSPLDSTLLSDIVEVGALPSFKCEDDEMRYAFYILTPHGLRYECSSNSKIKVDAWLSALQAECKLDCGATAPNGSV* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2374 242 ProSiteProfiles PH domain profile. 115 230 IPR001849 -
Amo05g2374 242 PANTHER OS05G0595500 PROTEIN 1 241 - -
Amo05g2374 242 SMART PH_update 116 232 IPR001849 -
Amo05g2374 242 Coils Coil 78 115 - -
Amo05g2374 242 SUPERFAMILY PH domain-like 109 229 - -
Amo05g2374 242 Gene3D - 114 235 IPR011993 -
Amo05g2374 242 CDD PH 118 225 - -
Amo05g2374 242 PANTHER OS05G0595500 PROTEIN 1 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2374 Amo-Chr5 50826139 50829882 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2374 - K00940 ccaj:109810881 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2374 05 50826139 50829882 Amo13g3281 13 104747567 104751382 PCT