Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2045 ATGGAAAGAGAGAGTAGTAATGAATGGGAGGATGAACCTCTAACACCGGCGGGGAGGCTGTTCGCGCAACCGGAGATGAGGCAAATAATCCACTGCGTAGTTGGAACCAAGAACCCTTTCGACATCGACTCCGTCAAATCTGAGCTCCGGAAGTCCGCCATGCTCCAACACCCGCGGTTCACCAGTCTCYTGGTCCGCGACCACCGCGGCAGGGAGCACTGGCGCCCCACCCAAGTTGACATCGAGCGCCACGTCCTCATCATCGACCGCCCTCTCTCCGACGCCGACCACGACTCCGCCGTCAACTCCTATCTTGCCGATTTGTCAACGGAGGGACTCAGCATGGAGAAACCCTTGTGGGAACTCCACATCCTGATGGCTCACAATTGCGCCATCTTCCGAATCCACCACTCCCTTGGCGACGGCATCTCCTTGATGTCTATGCTCCTCGCCTGCTGTAGGAAGCTCCACGATCCACACTCTGTCCCCACCATAGCCTCTTCTTCTTCTTCTTCTTCTTCCTCCTCTCGCTCTCGCAACACCACCTGGCCGAATATTCTTTGGAATCTTGCGGTTACCTTCTGGTTTTGCTTGGTCTTTGCCCTAGAGTTCATCCTGCGGTGTCTGTGTGTTCGTGACCGCAAAACTCCGCTCAGCGGCGGCGCCGGCGTTGAGTTGTGGCCCAGGAAGATTGCTACTGCCTCCTTTTCCCTCCAAGACATGAAGACCGTCAAGACGGCTGTTCCCACTGCGACCATAAATGATGTTCTATTTGCTGTTATATCATCTGGGATATCAAGATACTTGGATTTCCGAGCACCCAATGGGGTGCAAGAGGGGATTCAGCTAACAGGTTTAGCTATGGTTAATCTGAGAAAACAGCCAGGACTGCAGGAACTATCCAATCTGATGAAAAGCAATTCAGGAGCAAGGTGGGGTAACAAATTCGGTATGCTTCTCCTGCCTRTATATTATCACAGAAGCAACAATTCAGATCCTCTAGCATATCTCAAGAGAGCTAAAGCAATGATCGACAGAAAGAAACAGTCTTTGGAGGCCCATTTCTCATACAAAGTTGGAGATTTAGTAATGTCAACTCTTGGTCCAAAGTTTGCTAGCTGGCTAAATTACCGGATTCTCTGTAACACTACCTTCACAATCTCAAACGTGGTCGGACCGCAAGAAGATATCATGATGGTAGAAAATCCAGTAACATACTTGCGGGCAAATAATTCTGCCTTGCCTCATGCACTCATTTTGAATATGGTGAGCTATGCCGGACGGGCAGACATGCAAGTTCAGGTAGCCAAAGACATTATTCCCGACCCAGAGTTTCTTGCCAAGTGCTTTGAAGATGCTTTACTCGAAATGAAGGAGCAGGTTACGGCCAAAATCTAA 1398 0.5007 MERESSNEWEDEPLTPAGRLFAQPEMRQIIHCVVGTKNPFDIDSVKSELRKSAMLQHPRFTSLLVRDHRGREHWRPTQVDIERHVLIIDRPLSDADHDSAVNSYLADLSTEGLSMEKPLWELHILMAHNCAIFRIHHSLGDGISLMSMLLACCRKLHDPHSVPTIASSSSSSSSSSRSRNTTWPNILWNLAVTFWFCLVFALEFILRCLCVRDRKTPLSGGAGVELWPRKIATASFSLQDMKTVKTAVPTATINDVLFAVISSGISRYLDFRAPNGVQEGIQLTGLAMVNLRKQPGLQELSNLMKSNSGARWGNKFGMLLLPXYYHRSNNSDPLAYLKRAKAMIDRKKQSLEAHFSYKVGDLVMSTLGPKFASWLNYRILCNTTFTISNVVGPQEDIMMVENPVTYLRANNSALPHALILNMVSYAGRADMQVQVAKDIIPDPEFLAKCFEDALLEMKEQVTAKI* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2045 465 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 70 177 IPR004255 GO:0004144|GO:0045017
Amo05g2045 465 PANTHER O-ACYLTRANSFERASE WSD1-LIKE ISOFORM X1 8 461 - -
Amo05g2045 465 Pfam WS/DGAT C-terminal domain 312 458 IPR009721 GO:0004144
Amo05g2045 465 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 8 461 IPR045034 GO:0008374|GO:0045017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2045 Amo-Chr5 44181558 44186140 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2045 10 461 Acyl Lipid Metabolism Gene Families AT5G53390 37.155 5.00e-94 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2045 - - aprc:113868708 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2045 05 44181558 44186140 Amo15g0277 15 10122445 10126730 hybridization