Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1693 ATGGCAGCAAGTACTGCAACTGCACCACAATTTTTCAACCTCACTCACTCTCTTCCACCTTCTTCCAAGTTTCTCCATTTCACTAATGTTCCTTATTCTCTTCAACATCCCTTTCCTTCTGGAATCTTCTACAAGCATCGTTCACATCAATTACTAATCTGCAATTGCAATAGCAAGTTGAATAACTCGAGTGGAGGAGAACAATATGAGTTGGATGAAGGACTTTTCGGTGGGTATGATGGGGTTGATGACGAGAGTGATGAGGATGATGCAGAGAGCAGCCTCGATTTGTTTATCAGATTCTTTCAAAGCATGTTCAGGAAATTCTCTAAGCGTGCCAAGAAGGCCTCTCGCTCCGTTTTGCCATCAGTGATTTCGCCTCAGCTTGTTTCTTTTGCAGTGGATGGGACTCTGCTACTTGCTTCACTTTCCATAGCCAAAGCACTTCTTGAGGTCTTCTGCACACTTGGAGGCACTGTATTTGCTGCAATTCTGCTTCTGCGTGTGATTTGGGCAGCAGTTTCTTACTTCCAGTCAAGTGGAAATAGCTTCAATCAGGGTGGGAGTTCCTTTGGTGCTGTAGCCTAG 588 0.4456 MAASTATAPQFFNLTHSLPPSSKFLHFTNVPYSLQHPFPSGIFYKHRSHQLLICNCNSKLNNSSGGEQYELDEGLFGGYDGVDDESDEDDAESSLDLFIRFFQSMFRKFSKRAKKASRSVLPSVISPQLVSFAVDGTLLLASLSIAKALLEVFCTLGGTVFAAILLLRVIWAAVSYFQSSGNSFNQGGSSFGAVA* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1693 195 PANTHER ATP PHOSPHORIBOSYLTRANSFERASE REGULATORY SUBUNIT 4 193 IPR039324 GO:0009787|GO:0010100
Amo05g1693 195 PANTHER PROTEIN SHORT HYPOCOTYL IN WHITE LIGHT 1 4 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1693 Amo-Chr5 33349306 33351994 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1693 - - gmx:100785194 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g1693 05 33349306 33351994 Amo15g0264 15 9783211 9785991 hybridization