Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0471 ATGGCACTCAGGCTGTGGGCTTCTTCAACTGCAAATGTACTCAAACTATCTTCAGCAGCTTGTAGAACTCATCACCTCCCATCTCCCTTCTCTCTCTCCAGATGCTTCTCTACCGTGTTGGATGGACTCAAGTACGCAAACTCACATGAATGGGTCAAACATGAAGGCTCAGTGGCCACCATTGGAATCACTGACCATGCTCAGGACCATCTTGGAGAGGTTGTGTTTGTAGATCTGCCTGAACCAGGTGGTTCAGTGAAACAAGGAGGCAGCTTTGGAGCCGTTGAGAGTGTAAAGGCAACCAGTGATGTCAACTCTCCAATCTCTGGTGAAATCATTGAGGTTAACGCTTCTCTCAAGGAAACCCCTGGCCTGATAAACTCGAGCCCGTACGAAGGTGGATGGATGATAAAAGTAAAGCCAAATAGTCCAGCTGAATTGGATTCCTTGCTGGGACCAAAGGAGTACACTAAATTCTGCCAGGAAGAAGATGCTGCACATTGA 504 0.4762 MALRLWASSTANVLKLSSAACRTHHLPSPFSLSRCFSTVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEPGGSVKQGGSFGAVESVKATSDVNSPISGEIIEVNASLKETPGLINSSPYEGGWMIKVKPNSPAELDSLLGPKEYTKFCQEEDAAH* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0471 167 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 1 167 IPR002930 GO:0005960|GO:0019464
Amo05g0471 167 Gene3D - 37 167 - -
Amo05g0471 167 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 1 167 - -
Amo05g0471 167 TIGRFAM gcvH: glycine cleavage system H protein 41 164 IPR017453 GO:0005960|GO:0019464
Amo05g0471 167 Pfam Glycine cleavage H-protein 43 162 IPR033753 -
Amo05g0471 167 ProSiteProfiles Biotinyl/lipoyl domain profile. 58 140 IPR000089 -
Amo05g0471 167 SUPERFAMILY Single hybrid motif 39 162 IPR011053 -
Amo05g0471 167 CDD GCS_H 45 139 IPR033753 -
Amo05g0471 167 Hamap Glycine cleavage system H protein [gcvH]. 40 161 IPR002930 GO:0005960|GO:0019464
Amo05g0471 167 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 83 112 IPR003016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0471 Amo-Chr5 5480700 5481698 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0471 K02437 - csv:101222346 289.271