Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0466 GCAGCAGCTGCGGCGGCTGCTTGTATGGCTTTCTGCAATTCAGATTCCACATCACTCGCTACACTCTGTTTTGGTGGTGGCGGTGATGACAGCGACAGGTCAAACTCTCCCTTTGAGGTTCTCCCTGCTGATTACGGTGTCCACGTGGGAGCGGTGACTTCCGATTCACGCAGGAAAACTAAGATAGTGTGCACGATAGGTCCCGCTACCAGCTCCCGTGACATGATATGGAAGCTTGCCGAAACTGGAATGAACGTGGCGCGATTGAATATGTCCCATGGGGACTATGCATCGCACCAGAAGACCATTGATTTCGTTAAAGAATACAATGCTCAGTTTCAAGACAATGTTATAGCTATCATGCTTGACACCAAGGGTCCTGAAGTTAGGAGTGGGGATGTACCTCAGCCAATTTTACTCAAGGAAGGTCAAACATTCAATTTCACCATTAGGAGGGGTGTCTCCACTGAAGACACTGTCAGTGTCAATTATGATGACTTTGTCAATGATGTTGAGGTTGGAGACATATTACTCGTTGATGGGGGAATGATGTCTCTTGCTGTTAAGTCAAAGACAAATGACTCTGTTAAATGTGAAGTGATTGATGGTGGAGAATTGAAATCTAGGCGTCATTTGAATGTCCGGGGAAAAAGTGCAACACTTCCTTCCATAACTGAGAAGGATTGGGAAGATATCAAGTTTGGGGTAGACAATCAAGTAGACTTTTATGCTGTCTCATTTGTCAAGGATGCAAGAGTGGTTCATGAGTTAAAAGACTACCTCAAAAGTCATAATGCTGATATACATGTGATTGTAAAAATTGAAAGTGCGGATTCTATACCAAATCTTCATTCAATACTTTCAGCTTCAGATGGGGCCATGGTTGCTCGTGGTGACCTTGGAGCTGAACTTCCAATTGAGGAAGTTCCTTTACTGCAGGAGGATATCATAAGAAGATGTCATGGTATGCAAAAGCCGGTTATTGTGGCAACAAATATGCTTGAAAGCATGATTGCTCATCCTACACCAACAAGGGCAGAAGTGTCAGACATTGCAATTGCTGTAAGAGAAGGTACAGATGCCATCATGCTTTCTGGAGAAACTGCTCATGGAAAATATCCATTGAAAGCTGTTAAAGTTATGCACTCGGTGGCTTTAAGGACTGAATCAAGTATTCAGAATAGTGAAGCTTATCCAGGAAACTTAAGTCCGCATAAAAGCCATATGGGAGAAATGTTTGCTTTCCACTCGACAACTATGTCTAATACTCTTAATGCTCCTATCATTGTTTTTACCAGAACAGGATCCATGGCTATTCTTTTGAGCCATTATAGGCCTTACTCGACAATCTTTGCGTTCACAAATCAAGAACGGATTAAGCAGAGGTTGGCACTTTATCATGGGGTCATGCCCATATTCATGCAATTTTCAAATGATGCAGAGGAGACCTTCTCTAGAGCCATTAAGCTTCTCCTGAGTAAGGGTCATTTGCTCGAGGGACAGCATGTTACCCTTGTTCAAAGTGGAGCACAACCAATCTGGCGTGAGGAATCCACGCACCACATACAAGTTCGTAAGGTTCAAGGATAA 1590 0.4333 AAAAAAACMAFCNSDSTSLATLCFGGGGDDSDRSNSPFEVLPADYGVHVGAVTSDSRRKTKIVCTIGPATSSRDMIWKLAETGMNVARLNMSHGDYASHQKTIDFVKEYNAQFQDNVIAIMLDTKGPEVRSGDVPQPILLKEGQTFNFTIRRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTNDSVKCEVIDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVDNQVDFYAVSFVKDARVVHELKDYLKSHNADIHVIVKIESADSIPNLHSILSASDGAMVARGDLGAELPIEEVPLLQEDIIRRCHGMQKPVIVATNMLESMIAHPTPTRAEVSDIAIAVREGTDAIMLSGETAHGKYPLKAVKVMHSVALRTESSIQNSEAYPGNLSPHKSHMGEMFAFHSTTMSNTLNAPIIVFTRTGSMAILLSHYRPYSTIFAFTNQERIKQRLALYHGVMPIFMQFSNDAEETFSRAIKLLLSKGHLLEGQHVTLVQSGAQPIWREESTHHIQVRKVQG* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0466 529 TIGRFAM pyruv_kin: pyruvate kinase 58 527 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo05g0466 529 PANTHER PYRUVATE KINASE 50 527 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo05g0466 529 Gene3D - 58 388 IPR040442 -
Amo05g0466 529 ProSitePatterns Pyruvate kinase active site signature. 268 280 IPR018209 GO:0004743|GO:0006096
Amo05g0466 529 Gene3D - 389 507 IPR036918 -
Amo05g0466 529 SUPERFAMILY PK C-terminal domain-like 376 527 IPR036918 -
Amo05g0466 529 Gene3D - 127 222 IPR015806 GO:0004743|GO:0006096
Amo05g0466 529 PRINTS Pyruvate kinase family signature 240 254 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo05g0466 529 PRINTS Pyruvate kinase family signature 297 321 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo05g0466 529 PRINTS Pyruvate kinase family signature 270 296 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo05g0466 529 PRINTS Pyruvate kinase family signature 347 365 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo05g0466 529 PRINTS Pyruvate kinase family signature 366 382 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo05g0466 529 PRINTS Pyruvate kinase family signature 116 132 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo05g0466 529 PRINTS Pyruvate kinase family signature 322 346 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo05g0466 529 Pfam Pyruvate kinase, barrel domain 58 396 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo05g0466 529 SUPERFAMILY PK beta-barrel domain-like 127 218 IPR011037 -
Amo05g0466 529 PANTHER PLASTIDIAL PYRUVATE KINASE 3, CHLOROPLASTIC 50 527 - -
Amo05g0466 529 Pfam Pyruvate kinase, alpha/beta domain 420 507 IPR015795 -
Amo05g0466 529 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 57 393 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0466 Amo-Chr5 5418329 5423526 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0466 K00873 - twl:119987043 847.04