Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0456 ATGAACCGTGCAAGGGAGAGGAAGTCGAAGACATCGTCACCGTCGCTGATTCCAATGGGAATCGAACCTCCTCGCGATTTGCTTCCCTCCAAGCACGACTTCCCCAAGCTCCTCCTCGTTCTCGCCATCTCCACCCTCGTTGCTTGCTTCTGCAACCTCTTCTTCACCTCTTTCGTTAATCCCCCTACCAAACCCTTCTGCGATTCCAACTTCATCCACTCCTCACATTCATTTTCCGATGATTGTGAACCTTGCCCAACTCATGGAGAATGCTACGCTGGCATGCTCGAATGTTTCAAGGGTTACCGCAAGCATCGTAATTTATGCGTAGAAGACAGTGAAATTAGTGAATCAGCTCGCAAAATTGTGGAGAGAGTAGAGTTTCACCTTTGTGAAGAATATGCTCAGTTTATGTGCTATGAAACTGGATCAATTTGGGTTTCAGAGGATGAATTGTGGAATCGTTTGGAGCCATTTGGGGATGTCTCCTCGGACAATGCGCTTTATAATTTCACGAAAGAGAAGGCAATTGAGTCAATTGGTAAATCATTGGAGCTGAGGTTAAATTCTCATGGGATGAAGGAGTACAAGTGTCCAGATTCGTTGGCGGAGCATTACAAGCCATATGCCTGTCGCCTTCGTCAGTGGATACTACGGCACATTCTACTTGTTTTGCCTGTTTTTGCCATGCTTGTTTTATTGACAACTCTGTTCTGGAATGTCCGGCGGAAACTACGCATTTCAAAAAGAGTGGAGGAGCTTTACAACCAGGTCTGTGAAATACTTGAAGATAATGCATTGACGGCAAAGAGTGCGAATGATGAACGTGAACCCTGGGTTGTTGCTTCTAGGCTACGGGATCACCTGCTTTTGCCTAGAGAGCGGAAGGACCCTCTATTATGGAAAAAGGTAGAAGAATTGGTTCAAGAAGATTCGCGAGTAGATCGCTATCCCAAGTTGGTGAAGGGTGAATCAAAAGAGGTTTGGGAATGGCAAGTTGAAGGCTCTTTGAGTGCCTCAAAGATGAAGAATAAAAGAGATGCAAGCAAAACGGCGGTCAAAGAAGGCATGAACCTTAACTATCAAAACCAGCCCATTATGAAAGCGGAGCATAAGGAGCCACTGTTTTGA 1131 0.4553 MNRARERKSKTSSPSLIPMGIEPPRDLLPSKHDFPKLLLVLAISTLVACFCNLFFTSFVNPPTKPFCDSNFIHSSHSFSDDCEPCPTHGECYAGMLECFKGYRKHRNLCVEDSEISESARKIVERVEFHLCEEYAQFMCYETGSIWVSEDELWNRLEPFGDVSSDNALYNFTKEKAIESIGKSLELRLNSHGMKEYKCPDSLAEHYKPYACRLRQWILRHILLVLPVFAMLVLLTTLFWNVRRKLRISKRVEELYNQVCEILEDNALTAKSANDEREPWVVASRLRDHLLLPRERKDPLLWKKVEELVQEDSRVDRYPKLVKGESKEVWEWQVEGSLSASKMKNKRDASKTAVKEGMNLNYQNQPIMKAEHKEPLF* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0456 376 Pfam Man1-Src1p-C-terminal domain 65 331 IPR018996 -
Amo05g0456 376 MobiDBLite consensus disorder prediction 1 22 - -
Amo05g0456 376 Gene3D - 236 331 IPR041885 -
Amo05g0456 376 PANTHER INNER NUCLEAR MEMBRANE PROTEIN HEH2-RELATED 31 356 IPR044780 GO:0003682|GO:0005637
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0456 Amo-Chr5 5324316 5328080 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0456 - - aprc:113869566 543.888