Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0455 ATGGCAGACTTACCAGGATATTTGCGTTCTTGCCTGAGCATGGGAAAACTTGCCTTTTTGGCAATCTTGGTCTCTGGGGGAATTGTCTTGCAAATTTTGGCGTGTGCTTTGTATAATAATTGGTGGCCGATGCTAAGTGCTATAACATATGTTCTACTCCCAATGCCTCTGCTGTTCTTTGCGGGGTCTAATGGTTCTTCTGTATTTTCTGAATCTGAGAGCAGCTGGGTGAATTTAGCCAAGTTCTTGACTGGATTCTCAACTATTGGAAGCATTGCCATTCCAAGCATTCTAAAGCATTCTGGTGTTATTGGTTGGGGAGCCTTTGCAATGGAGCTTTCATCTTTCTTCGTGTTTGTATTAGCCATATTGTGTTTCATGGGGATGAATGATGAAGATGACTATTACAGTATGATATGA 420 0.4167 MADLPGYLRSCLSMGKLAFLAILVSGGIVLQILACALYNNWWPMLSAITYVLLPMPLLFFAGSNGSSVFSESESSWVNLAKFLTGFSTIGSIAIPSILKHSGVIGWGAFAMELSSFFVFVLAILCFMGMNDEDDYYSMI* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0455 139 Pfam Vacuolar protein sorting 55 17 133 IPR007262 -
Amo05g0455 139 PANTHER LEPTIN RECEPTOR-RELATED 1 136 IPR007262 -
Amo05g0455 139 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0455 Amo-Chr5 5318087 5320358 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0455 1 139 EF-hand Containing Proteins AT1G32410 70.714 5.75e-70 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0455 - - mnt:21406097 222.246