Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0448 ATGTCGACGGCAGGAACACCGTTGGATCCGCATGATAAGATGAGGGCTAGGGACGTGAGCAAAGTGGCGCGTGGCGAGCAAGCTCCGAGGCCTCCTCATGAATTCGGCACCGTTTCTCCACCTCCTCCTCCTTCTTCCACGGATTATATCGATGCTAAGAAAAGCAACCAGGATGAAAATGGTGCCAAAGTAGCAACCACGGATTATCAAACGCGGCACTGTTACGTGAAGTACGTGGAATATCACAGATGCATTAAGCAAAAGGGCGAAAAGACATTTGAATGCAATAAACTTGGCAATTCTCTTAGCTCCTCATGCCCAACTGAATTGATTGCAGAATGGGATAAGGAGAGAAGAGAAGGACAGTTTCCTGATGCGTTATAG 384 0.4792 MSTAGTPLDPHDKMRARDVSKVARGEQAPRPPHEFGTVSPPPPPSSTDYIDAKKSNQDENGAKVATTDYQTRHCYVKYVEYHRCIKQKGEKTFECNKLGNSLSSSCPTELIAEWDKERREGQFPDAL* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0448 127 Gene3D Cytochrome c oxidase, subunit VIb 43 127 IPR036549 GO:0005739|GO:0045277
Amo05g0448 127 Pfam Cytochrome oxidase c subunit VIb 66 118 IPR003213 GO:0005739|GO:0045277
Amo05g0448 127 SUPERFAMILY Cytochrome c oxidase subunit h 69 125 IPR036549 GO:0005739|GO:0045277
Amo05g0448 127 MobiDBLite consensus disorder prediction 1 64 - -
Amo05g0448 127 MobiDBLite consensus disorder prediction 10 28 - -
Amo05g0448 127 PANTHER CYTOCHROME C OXIDASE SUBUNIT 6B-3-LIKE 8 126 - -
Amo05g0448 127 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 71 114 - -
Amo05g0448 127 PANTHER CYTOCHROME C OXIDASE SUBUNIT 6B 8 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0448 Amo-Chr5 5267458 5273210 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0448 K02267 - gmx:102665439 167.933