Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0428 ATGGGTCGCAAGCACGATGAAAAAAGTACCATTCTTTACAACCGTTTGATCCTTCTCTTGGTCTCCTTTGCTTCCTGTGGTTTGGTCTACTTCTTCGTCTCTGCGGTCCTCACCAAAAACTCGTCCATTTCTTTGTCTGGGTCGTCGTCGTTGGCATTGGTCGGAGAAGGAGGTGGTGGAGGGTGCTGCAGAGGGATTGAGAATTTGGAGCTATGGGGTGCTGCAGTGAAGTGGGGTTCTGATTTTAAGTTCAACAGCTCCGAAGATTGCTGCAACGCTTGCAAATCAATGTGCACCGGGAATGATGGACCATGCCTCTGTGACACGTGGGTGTTCTGTGGGAACCGTGAAGCTTGTGGATCCAAGTTCGGTGAGTGTTGGTTGAAGAAGCAGAAGGACAGCTTAGCCCCTGAAAAGCAAGATGGTGGGCCTCCAGGGGAAGAAAATTATTGGATTTCTGGTCTCATCTTTGGAAAAGGAGAGGGTATTATTGCAATGGAAACTGAATTTGGAACTCTTCATATGAAACTTTTCCCTGACTGTGCTCCACACTCAGTTGCATACATTCTAGAGTTGCTGGCATTGCGCCACTGTGCAGGTTGCCAATTTTACCGTGCAGAGAGCCGAGGTGAATCATGGGATTCAGAAGGAAACCACATAAAAAATTTTCGTTATCATGTAAGAAATTTATGTTCCTTTCATACACATTTTGCATGGATTGGTCCTGGCCCAGAATTCTTTATTAGCTTAGCTAACCATGCAGAGTGGAAACATGAATACACTGTCTTTGGTTCTGTTCTTCCAGAAGACTTGCATGTTGCTGAGAAAATTGCTACCCTCCCTACAGCATCAGATGTTTGGAACAACATTAATGTCACCGTTTTGGAAAGACCTGTCCCCTTGTCGCTTGGTAGAATCAAGAAGAGGCATGAAGATTGA 939 0.4558 MGRKHDEKSTILYNRLILLLVSFASCGLVYFFVSAVLTKNSSISLSGSSSLALVGEGGGGGCCRGIENLELWGAAVKWGSDFKFNSSEDCCNACKSMCTGNDGPCLCDTWVFCGNREACGSKFGECWLKKQKDSLAPEKQDGGPPGEENYWISGLIFGKGEGIIAMETEFGTLHMKLFPDCAPHSVAYILELLALRHCAGCQFYRAESRGESWDSEGNHIKNFRYHVRNLCSFHTHFAWIGPGPEFFISLANHAEWKHEYTVFGSVLPEDLHVAEKIATLPTASDVWNNINVTVLERPVPLSLGRIKKRHED* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0428 312 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 164 291 IPR002130 GO:0000413|GO:0003755
Amo05g0428 312 Gene3D - 157 298 IPR029000 -
Amo05g0428 312 SUPERFAMILY Cyclophilin-like 154 294 IPR029000 -
Amo05g0428 312 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Amo05g0428 312 PANTHER EXPRESSED PROTEIN 236 309 - -
Amo05g0428 312 PANTHER EXPRESSED PROTEIN 1 225 - -
Amo05g0428 312 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 236 309 - -
Amo05g0428 312 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 1 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0428 Amo-Chr5 4944343 4947090 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0428 - - gmx:100820360 472.241