Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0426 ATGATCTCCGGAATCATCATCCTCAATGCGCATTCTCTCAGTGAAACCTCCACCGAGGCCTTTATCATCCGAATTTATCGATCACTGAACCGTGGCGGTTACGTCCGGGCTTTCTCCGATAAGCCGCACGCGATGATCTCCGGGTTCGCGAAGGCGGAGCGGACAATGAAGTTCTTACATGTGCGGAGGCTGCACCTTTGGCCAAGGTTTCAGGTCTACGTGTCGCAGGAGCTAGAAAGGGACCCGCCGGAGGTGGTGGACATCAGGGTTCCGATGAGCAGGTACATGGTGGGGATCCAGAAGGCCATTGTGGAGGTCATGGATGCTTGCTTGAAGGAGATGAGGAAGACCAATAAGGTCGACGTGGAGGATCTGACGGTGGAGAACGGGTTGTTCAAGTCGTTTGATGAGATCGTGAGGCGCCAATTAGACCCAATTTGGCATACTCTGGGGAAGAAGACTAAGCAACTTGTTTCGGACCTTAAGACATTGAGGAAACTGTTGGATTATCTTGTCAGGTATGATGCAGTAACTTACTTGAAATACCTGGATACGCTAAGAGTGTCCGAGAGTTTTCGATCTGTTTGGCTATTTGCAGAGGCAAGTTATAAGGTTTTTGACTTTGCAAAGAAACGTGTTTATCATCTTGTGAGGTCGGACGGTACAAAAGTAAGTGAAGTGAACAAGAGTGCTAAAAACAAAAAGAGGAAGGTTAAGGAGGATAACAAAGACAGTGAAGAAGATGATGGGACTTCTTCAAGTTCGAATGCCGGCTTAGTTTTGGAGGAAGTCTTGGAAGAAGCACCAAAATGGAAGGTCTTACGTGAGATTCTTGAGGAAATAGAAGAAGAAAGGCAAAAGCAAGGCGGGTTAACAGAGGAATTATTGGCCGAAGGTAAAGAAGACACTGACAATGGCATTGTATTGGTGGCATGTAAGGATGAACGATCATGCCTGCAGATTGAAGAATGCATTTTCAAAAGCCCACAAAAGTTCATGAGTGAAGAATGGAAAAAGTACTTGCTAAGCAAAGTACAGCTGCGTGATATAGTGCATAAGAAAAAGAAGCCAAAAGATCCCAAAGGTTTTGGGATTCTTGATGGAGTTACTCCCATAGCACCTGCTCAGAATGCGGAAACCAGCAGCATTAGTAAGCAGGAGCATGATGCACTTCTCGCAGCAGCATCAGGACTAAGAAGTCTTGCTGAAAATGACTTTGAAGATCCTCCTCAGCCAGATTTGGATGGACGGGGTCGTGGAAAAGGAAAGAGAAAAGTAGGGAATAAAAAGGGTCCAATCATTAATGATGTCTCTGAAGTACAAAGTGGTAGTAGAGAGGCTTCCACTAGTTATAAAGCTGAGACATCTGTAGACAACATGGTCCTTAGAAAGCATAAAAATCCTGATACTACAACAGCAAATGCAAATGCAAAGCCATTACCACCAGTACAGTTTTATGCCTTAGAAAGTGATCAGCCTATACTGGATATATTAAAGCCCTCTATAGTCATTGTTTACCATCCAGACGTGGCCTTTGTTAGGGAAATAGAAGTTTACAAAGCTGAGAATCCCTCAAAAAAGTTGAAAGTATATTTTCTATTCTACGAAGATTCTACTGAGGTTCAGAAGTTTGAGGCGAGTATACGTAGAGAGAATGGAGCATTCGAATCTTTGATAAGACAAAAATCTATGATGATGATTCCAGTTGATCAGGGTGGACATTGTTTGGGAATGAATTCTACTTTTGAGTCAGATTTAAGTACTTCTCAAAATTCAATGACCAGAAGAGCTGGTGGGAGAAAGGAGGTTGATAAAGAAATGCAGGTCATTGTGGACATGCGAGAGTTCATGAGCAGTCTTCCCAATGTTCTTCATCAGAAGGGGATGCGCATCATTCCAGTGACACTAGAAGTTGGTGACTACATCCTGTCACCATTAATTTGCGTGGAAAGAAAAAGTATTCAAGATCTCTTTATGAGCTTCACATCAGGTCGTCTATACCACCAGGTGGAGACAATGGTGCGATATTATAGGATTCCTGTTCTGTTGATAGAGTTTTCACAGGATAAGAGCTTTTCATTCCAGTCTGCTAGTGATATTGGTGATGATGTGACACCAAATAACATTATATCAAAGCTGTCATTGCTTGCTCTACACTTTCCACGGCTACGAATTATCTGGTCTCGAAGTTTGCATGCAACTGCTGAAATATTTGCTGCACTGAAGGCAAATCAAGATGAACCGGATGAAACAAAAGCTATGAGAGTGGGTGTCCCCTCTGAAGAAGGAATTGTGGAGAACGACGTAAGAGCTGAAAATTACAACACGTCGGCTGTGGAGTTTCTAAGAAGACTGCCAGGCGTTACAGATTCAAACTACAGGACCATAATGGATGGATGTAAGAGCTTGGCTGAACTTGCGCTTCTTCCTTTGGAGAAGCTAGCCGAATTAATGGGTGGTCATAAAGCTGCTCGGACTCTCAGAGAATTTCTTGATGCTAAATATCCAACTCTGTTGTGA 2520 0.4337 MISGIIILNAHSLSETSTEAFIIRIYRSLNRGGYVRAFSDKPHAMISGFAKAERTMKFLHVRRLHLWPRFQVYVSQELERDPPEVVDIRVPMSRYMVGIQKAIVEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWLFAEASYKVFDFAKKRVYHLVRSDGTKVSEVNKSAKNKKRKVKEDNKDSEEDDGTSSSSNAGLVLEEVLEEAPKWKVLREILEEIEEERQKQGGLTEELLAEGKEDTDNGIVLVACKDERSCLQIEECIFKSPQKFMSEEWKKYLLSKVQLRDIVHKKKKPKDPKGFGILDGVTPIAPAQNAETSSISKQEHDALLAAASGLRSLAENDFEDPPQPDLDGRGRGKGKRKVGNKKGPIINDVSEVQSGSREASTSYKAETSVDNMVLRKHKNPDTTTANANAKPLPPVQFYALESDQPILDILKPSIVIVYHPDVAFVREIEVYKAENPSKKLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQGGHCLGMNSTFESDLSTSQNSMTRRAGGRKEVDKEMQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNNIISKLSLLALHFPRLRIIWSRSLHATAEIFAALKANQDEPDETKAMRVGVPSEEGIVENDVRAENYNTSAVEFLRRLPGVTDSNYRTIMDGCKSLAELALLPLEKLAELMGGHKAARTLREFLDAKYPTLL* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0426 839 SUPERFAMILY Restriction endonuclease-like 605 743 IPR011335 -
Amo05g0426 839 Coils Coil 228 248 - -
Amo05g0426 839 Coils Coil 274 298 - -
Amo05g0426 839 Pfam ERCC4 domain 611 740 IPR006166 GO:0003677|GO:0004518
Amo05g0426 839 SMART ERCC4_2 608 688 IPR006166 GO:0003677|GO:0004518
Amo05g0426 839 MobiDBLite consensus disorder prediction 402 435 - -
Amo05g0426 839 PANTHER DNA REPAIR ENDONUCLEASE XPF 2 835 - -
Amo05g0426 839 Gene3D - 608 754 - -
Amo05g0426 839 Gene3D - 766 837 - -
Amo05g0426 839 SUPERFAMILY RuvA domain 2-like 770 834 IPR010994 -
Amo05g0426 839 MobiDBLite consensus disorder prediction 228 255 - -
Amo05g0426 839 MobiDBLite consensus disorder prediction 228 250 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0426 K10848 - gmx:100812359 1341.25