Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0412 ATGAAGGCTCAAGTCCGGAAGGAAGATGTTGTTATCGTGGGTGCTGGCATTGCTGGCCTTGCAACTGCTGTCTCCCTTCACAGGCTTGGAGTTAAGTCCCTCGTTCTTGAGCAGGCTGACTCCCTTCGAACCGGTGGCACTTCCCTCACCCTCTTCAAGAACGGCTGGAGGGTACTCGATGCTATTGGAATCGCTCATTATCTCAGACCTCACTTCTTGGAAATTCAAGGGATGGTGGTGAAGTCTGAAGATGGCAGAGAACTACGCTCCTTCACTTTTAAACAAGAGGATCAAAGCCAAGAGGTGCGAGCTGTGGAAAGGCGAGTACTTTTGGAAACCTTAGCTGCCCAGCTCTCCCACGATGTAATTCAGTTTTCTTCAAAGCTAGCAAGGATTGAATCAAATCCAGATGGAGAAACCTTGTTGGAACTTGCAGATGGGTCTAAGCTTCTTGCAAAGATTTTGATAGGTTGTGATGGGATTCGATCACCAATAGCAAAGTGGATGGGGTTTTCTGAGGCAAATTATGTTGGTCCAAAAATAACTGATCCAAGTGTTCTTAAGAAGGAAGCTAAAGAACTAGTCAAGAATTGGCCTTCGGAGCTTTTGGACATAGTGGACGCTACAGCCGACGAGACTGTCAGCAAGACTCCGCTGGTAGATCGGTGGCTTTGGCCGGCCGTAAGTCCACCTGCTTCTGCTGGTAAAGTGGTGGTGGTCGGAGATGCTTGGCATCCGATGACTCCGAATCTGGGGCAAGGAGCATGTTGTGCACTTGAGGATGCTGTGGTTCTTGCTAAGAAGCTTGCAAGGGCCATCAAGTCTAATGAGGACCACTCATCAGTTGAAGAAGCTTTGAGGTCATATGGCAGTGAAAGATGGCCCCGAGTGTTTCCTCTCACTGTTCGTGCATACTTTGTGGGTTCCATATTGCAGTGGGAGAATCCATTGGTGTGTTCTGTTAGGAACAACATTGTCATACCTAAGTTAGTAAGGCTTGGACCATTGTTGGAGCATACAAATTTTACTCCTGAGAGTCTATGA 1044 0.477 MKAQVRKEDVVIVGAGIAGLATAVSLHRLGVKSLVLEQADSLRTGGTSLTLFKNGWRVLDAIGIAHYLRPHFLEIQGMVVKSEDGRELRSFTFKQEDQSQEVRAVERRVLLETLAAQLSHDVIQFSSKLARIESNPDGETLLELADGSKLLAKILIGCDGIRSPIAKWMGFSEANYVGPKITDPSVLKKEAKELVKNWPSELLDIVDATADETVSKTPLVDRWLWPAVSPPASAGKVVVVGDAWHPMTPNLGQGACCALEDAVVLAKKLARAIKSNEDHSSVEEALRSYGSERWPRVFPLTVRAYFVGSILQWENPLVCSVRNNIVIPKLVRLGPLLEHTNFTPESL* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0412 347 Gene3D - 9 180 IPR036188 -
Amo05g0412 347 SUPERFAMILY FAD/NAD(P)-binding domain 9 325 IPR036188 -
Amo05g0412 347 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 4 178 - -
Amo05g0412 347 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 178 344 - -
Amo05g0412 347 Gene3D - 181 306 IPR036188 -
Amo05g0412 347 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 - -
Amo05g0412 347 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 - -
Amo05g0412 347 Pfam FAD binding domain 9 172 IPR002938 GO:0071949
Amo05g0412 347 Pfam FAD binding domain 232 297 IPR002938 GO:0071949
Amo05g0412 347 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 4 178 IPR044560 -
Amo05g0412 347 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 178 344 IPR044560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0412 Amo-Chr5 4781738 4783425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0412 8 341 Miscellaneous Gene Families AT5G05320 31.646 8.95e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0412 - - gmx:100787671 542.732