Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0410 ATGATGATGATGCAGATGTGCTCCACCGTGCCATCAGTTCACAACATCCATAACAAGTTGCAGGCAACAAGGTGCCCCAGTTTCAGATGCCGCGCCGCCTCACCTCTCAACCCTGCAGCTTCCGTCAAGCCCTTCGTTTCTACCGAGTCAACTCGCTTGCACCTCTCTAACCTCGAAAAGCTCCTCGATACCCAAAAGCCCCTCCAACAACAACACAATAAAATCACAAGCACTGACGATTTATCATCGTCCACGGAGAAGAAAGCAAAAAGTTTCCTTGAAGGACTCAACTTAGGGAGATTGTGGAGTTCGGAAATGAAAGCAGCCGCCGAGGATATGTCCCCGCGAAACCTCCACCGCCTGCAGCGCCTCCTCTCCAAGACAGCCGAGTACTCGCCGCGAAACGTCCTCGGCAGCCGGTGGAGGGAGTACCACGGCAGCAATGACTGGAAAGGGATGCTCGATCCGCTCGATGAGAATCTCCGCCGGGAGGTTGTCCGGTACGGCGAGTTCGTCCAGGCCGCCTACCAAGCTTTCCACTCTGACCCCGCCATGTCCACGGAGGCCCCGCCAGAGCCCCGCCACGTAGCCCTCCATGACAGGACATATAAGGTCACCAAGAGCCTCTACGCCACGTCATCTATTGGGTTGCCCAAATGGGTCGATGACGTGGCACCGGATCTCGGGTGGATGACCCAGCGCTCTAGCTGGGTCGGGTACGTCGCAGTTTGTGATGACCAAAGAGAGATCGCACGGTTGGGAAGGAGGGACATCGTGATTGCCCTTCGCGGAACTTCAACTTGTCTGGAATGGGCCGAGAATCTTCGAGCCCAGTTGATTGATCACCCTGATGATAACAAGGAAGATGATAACCAAGGAAGGCCCAAAGTGGAGTGCGGGTTCTTGAGCCTGTACAAGACACGTGGTGCTCACGTGCCTAGCTTAGCCGAGTCTGTGGTGGAAGAAATTAAGCGGTTATTGGAGGTTTACAAGGGTGAGAGCCTAAGCATCACAATCACAGGCCACAGTTTGGGGGCAACGCTGGCCTTGTTGGTGGCCGATGAGATAAGCACGTGCAGCCCAAACATGCCACCAGTGGCTGTTTTCTCCTTTGGTGGGCCTCGAGTGGGTAACAAGGCCTTTGGAAACAGAGTTACGGCCCGTAATGTGAAAGTGCTGAGAATTGTGAACTCGCAAGACGTGATTACGAGAGTGCCTGGAATATTTGTAAGCGAGGAGGTAGAGGAAAAAATAAGGAACTCCAAGGTTGGTGGTGGTGTCATGAACATGCTTGAAGAGAATACACCGTTGGCTTACTCACACGTGGGGACCGAGCTACGTGTCGACACCAAGATGTCGCCTTATCTAAAGCCGGATGCTGACATGGCATGTTGCCATGACCTGGAGGCTTACCTGCACTTGGTGGATGGTTTCCTGGCATCTAATTGTCCATTTAGAGCAAATGCTAAGAGAAGCCTGGCTAGATTGATGCAGGATCAAGGCTCTAATGTCAAGAAATTGTATGTTAGTAAGGCAAAAGCCTTGACTGTTAATCTTAAGAGACAAGGATCTATGTCCATGTCCATGTCCACTTGTTTGCCGAGTCCATCTTAA 1614 0.5248 MMMMQMCSTVPSVHNIHNKLQATRCPSFRCRAASPLNPAASVKPFVSTESTRLHLSNLEKLLDTQKPLQQQHNKITSTDDLSSSTEKKAKSFLEGLNLGRLWSSEMKAAAEDMSPRNLHRLQRLLSKTAEYSPRNVLGSRWREYHGSNDWKGMLDPLDENLRREVVRYGEFVQAAYQAFHSDPAMSTEAPPEPRHVALHDRTYKVTKSLYATSSIGLPKWVDDVAPDLGWMTQRSSWVGYVAVCDDQREIARLGRRDIVIALRGTSTCLEWAENLRAQLIDHPDDNKEDDNQGRPKVECGFLSLYKTRGAHVPSLAESVVEEIKRLLEVYKGESLSITITGHSLGATLALLVADEISTCSPNMPPVAVFSFGGPRVGNKAFGNRVTARNVKVLRIVNSQDVITRVPGIFVSEEVEEKIRNSKVGGGVMNMLEENTPLAYSHVGTELRVDTKMSPYLKPDADMACCHDLEAYLHLVDGFLASNCPFRANAKRSLARLMQDQGSNVKKLYVSKAKALTVNLKRQGSMSMSMSTCLPSPS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0410 537 Gene3D alpha/beta hydrolase 140 528 IPR029058 -
Amo05g0410 537 MobiDBLite consensus disorder prediction 64 80 - -
Amo05g0410 537 CDD Lipase_3 161 476 - -
Amo05g0410 537 Pfam Lipase (class 3) 259 408 IPR002921 GO:0006629
Amo05g0410 537 MobiDBLite consensus disorder prediction 64 86 - -
Amo05g0410 537 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 4 521 - -
Amo05g0410 537 SUPERFAMILY alpha/beta-Hydrolases 161 478 IPR029058 -
Amo05g0410 537 PANTHER GLYCEROLIPASE A1 4 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0410 Amo-Chr5 4776648 4778609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0410 6 537 Acyl Lipid Metabolism Gene Families AT4G16820 57.885 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0410 - - gmx:100806573 823.542