Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2619 ATGGGCTGCGCGGCCTCCAAGCTCGACAATGAGGACACCGTCCGCCGCTGCAAGGACCGCCGCCGCTTCATGAAGGAGGCTGTCTACGCCCGCCACCTCCTTGCCGCCGCCCACTCTGACTACTGCCGCTCCCTCCGCCTCACCGGCTCCGCTCTCTCTACCTTCGCCACCGGTGAACCCCTCTCCGTCTCCGACACCACCCCCGCCGTCTTCCTCCACCCTCCACCACCACAACCAAAACAACCACCACCACCACAACAACAACAACAACAACAACTACCACCATTGTTTATACCTTCACCTTCACCTTCACCTTCACCTACCATACCCGAAACCAAAACCGAAACAGCAAGAAACCACGACTACAACAATAACAATAATAACCGTAACTACCATAACCGTCAAAACCGTAGAAAACCGCCGAAATTACCTCACATTCTTTCAGATTCGAGTCCTTCCGATACTCCTCGAAGTAACTACTCGAATATCTTCCCAACCGCGTATTCTACTTATTCAACTACTCCTTCTCAAGCTTCCTCTGTTTGGAATTGGGAAAATTTTTACCCTCCTCCACCACCACCTCCTCCTCCTGCTTCTGATTACTTCGATCAAAGAAGCCACGTCAGCACCAACATCACCAATAATAAGAAGCAGTGTTCACAAATCGACACCGAAGAAGAAGAAGACGAAGAACACTATTCAGAAGAAGATGAAGATGAAGAATATTCGGGACCGCGTTCTGAACAGAACTTTAATACTAATCAMCATCATCATCATCATCAACAGCAGCATCAGCATCAGCGTCAGCAGTTGGATGATGATGAGAGATCGGAGTATGATTTCTTCAAACACGGAGAACAAGCGTCGTTTCGAAAACAAGCGTCGTTTAAGAAAGAGGGGATGTCGTTTCAGAAGCAGCATCATCTGATTGAGGATTATGCTGAGACTGAGAGGGAGGAAGTTCATTGCAGCGAGTGGGGGGATCATTACAGCACCACTACCAGCTCCGACGATGACGGTGGCGGCCATGGTGGTCGTGTTGGTGCAGTGGTGGAGGAGGAGGAGGAGGATTCTAGGTCTGAGAGGAGCAGGTCAAATTTCGGATCGTCAGTGAGGGGGTCTTCCATGAGGGGATCGTCGGTGGTCGGAGATCCAGTGACGCCGCCTCCTCCGATGGCAGGGAAGAAGGCGGCGCCGGTGGCGGAGGAGGATGATGCAAGGAGCAAGTATGGGGAGATGATGGAGATGAAGATGGTGGTGCGGCATAAGGACTTGAAGGAAATCGTGGAAGCCATTAAAGAGAGCTTTGACAAAGCTGCCGTGGCCGGAGATCAGGTCTCTGAGATGCTTCAGATCAGTCAGGCACAACTCGATCGCAGTTTCAAGCAATTGCGGAAAACTGTGTATCATTCAAGCAGTTTATTGAGCAACCTGAGCTCCACTTGGTCCTCAAAACCACCATTGGCAGTTAAGTACCGGCTGGACACTGGTTCGCTGGCTGAACCAGGCGGTCTGAAGAGTCTCTGCTCCACTCTGGAGCGACTTCTGGCTTGGGAGAAGAAGCTCTACGAGGAAGTTAAGGCAAGAGAAGGTTGGAAGATTGATCATGAGAAGAAATTGTCAGCGCTGCAGAGTCAGGAATACAAAGGAGAGGATGAAGCAAAGATATTCAAAACCAAGACTTCCATAAATAAGTTGCAATCACTAATTATTGTCACATCTCAGGCTGTGACTGCCACCTCAACCGCCATTATTGGCCTTAGGGACTCTGATCTTGTTCCTCAGCTTGTTGACCTTTGTCATGGATTCATGTACATGTGGAGATCAATGCACCAGCACCATGAAACTCAAAGCAACATAGTACAGCAAGTCCGTGGCCTTGTGAACAGATCTTCCAGAGGCGACTCAACTTCTGAGCTGCACAGACAGGCGACACGTGATCTTGAATCCGCTGTGTCGGCTTGGCACTCCAGCTTCTGTCGCCTTATAAAATTTCAGCGCGACTTCATCGTCTCCTTACATGCCTGGTTCAAGCTTAGCCTTGTTCCAGTCCATAATGATAATGTCAACCTCAGCATCTGCCGGGAACCCAACGATGCATACATGTTTTTTGATGAATGGAAGCTCGCCCTTGAACGTGTCCCYGACACGGTTGCATCTGAGGCCATCAAGAGCTTCATCAACGTTGTCCACGTGATATACACCAAGCAATCYGAGGAGCTCAAGATCAAGAAGCGAACCGAGAGCGCTTCCAAGGAACTCGAGAAGAAGTCTTCGTCCTTGAGAACCTTRGAGAGGAAGTTTTATAATTCTTATTCTATGGTAGGCATTAGTCTTCCTGATACCGGACCGGAYAACGGACAAGGTCTGGACGCACGGGACCCCCTAGCTGAGAAGAAATTGGAACTTGCAACATGCCAGAGGCGAGTCGAAGACGAAATGCTGAGGCACTCAAAGGCTGTGGAGGTGACAAGAGCAATGACACTCAACAATCTGCAGACAGGGTTGCCTGGAGTTTTCCAAGCACTTACCAGTTTCTCTTCATTGTTCACTGAGGCTCTTGAATCTGTGTGTACGCGTTCCTATGCCATCAAGTAG 2598 0.4969 MGCAASKLDNEDTVRRCKDRRRFMKEAVYARHLLAAAHSDYCRSLRLTGSALSTFATGEPLSVSDTTPAVFLHPPPPQPKQPPPPQQQQQQQLPPLFIPSPSPSPSPTIPETKTETARNHDYNNNNNNRNYHNRQNRRKPPKLPHILSDSSPSDTPRSNYSNIFPTAYSTYSTTPSQASSVWNWENFYPPPPPPPPPASDYFDQRSHVSTNITNNKKQCSQIDTEEEEDEEHYSEEDEDEEYSGPRSEQNFNTNXHHHHHQQQHQHQRQQLDDDERSEYDFFKHGEQASFRKQASFKKEGMSFQKQHHLIEDYAETEREEVHCSEWGDHYSTTTSSDDDGGGHGGRVGAVVEEEEEDSRSERSRSNFGSSVRGSSMRGSSVVGDPVTPPPPMAGKKAAPVAEEDDARSKYGEMMEMKMVVRHKDLKEIVEAIKESFDKAAVAGDQVSEMLQISQAQLDRSFKQLRKTVYHSSSLLSNLSSTWSSKPPLAVKYRLDTGSLAEPGGLKSLCSTLERLLAWEKKLYEEVKAREGWKIDHEKKLSALQSQEYKGEDEAKIFKTKTSINKLQSLIIVTSQAVTATSTAIIGLRDSDLVPQLVDLCHGFMYMWRSMHQHHETQSNIVQQVRGLVNRSSRGDSTSELHRQATRDLESAVSAWHSSFCRLIKFQRDFIVSLHAWFKLSLVPVHNDNVNLSICREPNDAYMFFDEWKLALERVPDTVASEAIKSFINVVHVIYTKQSEELKIKKRTESASKELEKKSSSLRTLERKFYNSYSMVGISLPDTGPDNGQGLDARDPLAEKKLELATCQRRVEDEMLRHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALESVCTRSYAIK* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2619 865 MobiDBLite consensus disorder prediction 265 293 - -
Amo04g2619 865 MobiDBLite consensus disorder prediction 186 200 - -
Amo04g2619 865 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Amo04g2619 865 MobiDBLite consensus disorder prediction 364 381 - -
Amo04g2619 865 MobiDBLite consensus disorder prediction 109 131 - -
Amo04g2619 865 MobiDBLite consensus disorder prediction 148 184 - -
Amo04g2619 865 PANTHER BZIP DOMAIN CLASS TRANSCRIPTION FACTOR (DUF630 AND DUF632)-RELATED 1 865 - -
Amo04g2619 865 MobiDBLite consensus disorder prediction 348 363 - -
Amo04g2619 865 MobiDBLite consensus disorder prediction 58 298 - -
Amo04g2619 865 Coils Coil 747 767 - -
Amo04g2619 865 MobiDBLite consensus disorder prediction 203 219 - -
Amo04g2619 865 MobiDBLite consensus disorder prediction 224 243 - -
Amo04g2619 865 PANTHER UNCHARACTERIZED 1 865 - -
Amo04g2619 865 MobiDBLite consensus disorder prediction 70 108 - -
Amo04g2619 865 MobiDBLite consensus disorder prediction 324 409 - -
Amo04g2619 865 Pfam Protein of unknown function (DUF632) 425 731 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2619 Amo-Chr4 99320183 99325782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2619 1 77 Acyl Lipid Metabolism Gene Families AT2G27090 30.851 5.22e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2619 - - adu:107486161 1434.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3591 14 140085698 140091064 Amo04g2619 04 99320183 99325782 hybridization
Amo19g0688 19 10725568 10731752 Amo04g2619 04 99320183 99325782 PCT