Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2433 ATGGCCAATAATTCTATTCTATCATCATCACTAATCTGTTGCTTATTATTTCTTTTGTTGAATCACCATTATTGGATCTTTGTTGAAGCTGCTCCTTCAGGTTCTCTTGTTACACAGCTCCCTGGCTTTGATTCCAATTTCCCATCCAACCATTACTCCGGATACATAAATATTGATGGAAATGGTGAGAATGGGAAGAACCTGTTCTACTACTTGGTTAGTTCAGAAAGAAATCCAAAGAAGGATCCACTTGTTCTGTGGCTCAATGGTGGTCCTGGCTGCTCTAGTTTTGATGGATTTGTTTATGAGCATGGACCGTTCAACTTTGAGGCAGCAAAATCAAAAGGGAGTCTCCCCACTTTGCATACTAATCCTTACAGCTGGTCTAAGGTTTCAAATATAATATATTTGGATTCTCCAGTAGGGGTTGGGCTCTCATACTCCAAGAACTCGACCAAATATGTTACTGGGGACCTACAAACCGCGTCTGATACCCATGCTTTCCTCTTAAAGTGGTTAGAGCAATATCCGGAATTCCTGGCTAATCCATTCTATATTGCTGGCGAATCGTATGCTGGAGTTTATGTGCCCACTCTAGCTTTTGAAGTAGCAAAAGGAATCCGGAGTGGTACAAAGCCCGTGATCAACTTTAAGGGTTACATGGTGGGTAATGGTGTCACGGACGAGATTTTTGATGGAAATGCTCTTCTCCCATTTGTGCATGGAATGGGCCTCATATCCGACAGTATCTATGAGGATGTAGAAACTTCCTGCAAGGGAAACTTCTACAAATATTACTCTGAGGATGCTGAAGATAATAATAATGATGATTCATGCAGTAAGAGCTTTGAAAAAGTTGATAGGGCTATCGACGGCCTTAACGTGTATGATATATTGGAACCATGTTACCATGAAGGAGATTCAAATTCAGCATGGATAAAAGCAGCCATTGCTAATGGAACATTGCCAAAGAGTTTTCAAGAATTAGGGTTCACTAATAATAATGATGAGAGGCATCTCAAAGTGAGGAAGAGGATGTTTGGTAGAGCTTGGCCTTTTAGGGCACCTCTCAAACAAGGCCTTGTTCCTTTATGGCCCCAATTATTGGCTCAAACCAGACATGTTGCTTGTGTTAGTGATGTAGTTGCAAGTTCATGGCTAAACAACAATGCAGTAAGGAAAGCCATTCATGCTGAGGAGGAAAGTGTGACAGGGGCATGGGAATTATGCACCGGAAAGATAGAATACAGTCATGATGCTGGAAGCATGATTCCTTACCACAAGAACCTAACTGCCCTTGGTTATAGGGCACTTATTTTCAGTGGAGACCATGATATGTGTGTTCCATTTACTGGAAGTGAAGCATGGACTCGCTCACTTGCATATAACATTATTGATGAATGGAGACCGTGGAACTCCAATGGCCAAATTGCTGGATATTTACAAGGATATGACAACAACCTTATCTTTCTTACAGTTAAGGGAGCTGGGCACACAGTGCCAGAGTATAAACCACGTGAGGCACTTGATTTTTACACTCGTTGGTTGGAAGGAAGACCAATATAA 1566 0.4157 MANNSILSSSLICCLLFLLLNHHYWIFVEAAPSGSLVTQLPGFDSNFPSNHYSGYINIDGNGENGKNLFYYLVSSERNPKKDPLVLWLNGGPGCSSFDGFVYEHGPFNFEAAKSKGSLPTLHTNPYSWSKVSNIIYLDSPVGVGLSYSKNSTKYVTGDLQTASDTHAFLLKWLEQYPEFLANPFYIAGESYAGVYVPTLAFEVAKGIRSGTKPVINFKGYMVGNGVTDEIFDGNALLPFVHGMGLISDSIYEDVETSCKGNFYKYYSEDAEDNNNDDSCSKSFEKVDRAIDGLNVYDILEPCYHEGDSNSAWIKAAIANGTLPKSFQELGFTNNNDERHLKVRKRMFGRAWPFRAPLKQGLVPLWPQLLAQTRHVACVSDVVASSWLNNNAVRKAIHAEEESVTGAWELCTGKIEYSHDAGSMIPYHKNLTALGYRALIFSGDHDMCVPFTGSEAWTRSLAYNIIDEWRPWNSNGQIAGYLQGYDNNLIFLTVKGAGHTVPEYKPREALDFYTRWLEGRPI* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2433 521 Gene3D alpha/beta hydrolase 30 337 IPR029058 -
Amo04g2433 521 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 519 IPR001563 GO:0004185|GO:0006508
Amo04g2433 521 ProSitePatterns Serine carboxypeptidases, serine active site. 186 193 IPR018202 GO:0004185
Amo04g2433 521 Pfam Serine carboxypeptidase 41 518 IPR001563 GO:0004185|GO:0006508
Amo04g2433 521 ProSitePatterns Serine carboxypeptidases, histidine active site. 488 505 IPR033124 GO:0004185
Amo04g2433 521 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 25 519 - -
Amo04g2433 521 SUPERFAMILY alpha/beta-Hydrolases 37 520 IPR029058 -
Amo04g2433 521 Gene3D - 374 521 - -
Amo04g2433 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Amo04g2433 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Amo04g2433 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Amo04g2433 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 488 501 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2433 Amo-Chr4 96825405 96834362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2433 382 521 Calmodulin-binding Proteins AT2G22960 50.000 5.23e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2433 K16296 - gmx:100790895 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo04g2433 04 96825405 96834362 Amo02g0311 02 3845213 3847715 PCT