Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2330 ATGAATACGAACAGAAGAAGAAGGAGTGAACAAGTGACAAACCAAGAGATGGATGAGGAAGTGTTGAAGAAGTCACCACCTTCTCAAGAAAAATATGGCAGGGCTCAATTTGCAATAAGGTTAATGGTGCTGGTTTTGTTTTTGGCTTGGGTTTTTGTTTGGGTAGTGGCTCCAACAGACACTTATAAACAGATATGGTTACCGCAACTAAAAGCAAAGATCAATTCTTCATATTTTGGAAAACAAGGTGCAACACTTCTCCTGTTCACTGTTCCAATATTGTTCATAGCTGTTTTGGGAAGTATCTACCTCCATATAGCAAAGAAATACAATTATTTCAAAATMGAAAGGAGCAAGAATGGGAAGAAGTGTGAGGGAGTATTCATAGGGAAGCGTCCAATGCTTGTGAGAGGCCCTCTTGGCATTGTTTCTGGCACAGAACTTGCCTTGTTGTTTATGTTCATTGTGCTACTAGTTTGGTCCTTTTCAAATTATCTAAACAACAGCTTTGCCAAAATTTCTCAGAAATCAGCAGCAGAAGATGGAGAAAAAGTATGGCAGAAGAAACTAGATAAATCAGCACTAATGTTGGGGAAAGTTGGAAACATATGCTTGGCAATGTTGTTTTTRCCAGTGACACGTGGCTCCTCATTGTTGCCACTGGTTGGTCTAAAATCAGAGAGTTGCATAAAGTACCATATTTGGCTTGGAAATATGCTCATGACAATCTTCACTGCTCATGGCCTTTGCTACATCATTTATTGGGCAGTGACTAATCAACTTTCAAAGATGCTAGAATGGAAAAAAACAGGGATATCAAATGTAGCAGGAGAGTTAACTTTGCTAATTGGTCTTTTAATGTGGCTTACAACATTCCCTCGCATTAGGAGAAAAGCCTTTGAGCTTTTCTTCTACACACACCACCTCTACATCCTRTTCATTGTGTTGTTCATCTTTCATGTGGGAATCTCCTATGCTTGTATTATGCTCCCTGGTTTCTACCTCTTCTTGGTTGATCGTTATCTAAGGTTCTTGCAATCAAGACAGCGAGCTCGGTTGGTTTCTGCTGGTGTTTTGCCATGGTTGACATATAATCCCACAAGTATTGTGTTCATAAACATACCAAGCATATCAAAGTTGCAGTGGCATCCATTTACAGTTACTTCTAATAGTAACTTGGAGCCTGAAATTCTAAGTGTTGTCATTAAGAGTGAGGGAGCTTGGTCCCAGAAACTCTATCAGATGCTTTCAGTACCATCTGCAATTGATCATCTCAATGTCCATGTTGAAGGTCCTTATGGACCTGTATCTACCGATTATCTAAGGCACGAAACTCTTGTGATGATTAGTGGAGGCAGTGGCATCACCCCTTTTGTGTCTATCATCAGAGAGCTAATATATCTGAACATAACATTGAGATACAGAACTCCAAAACTTACCTTAATTTGTGCATTTAAGAACACCTCTTGTCTCTCAATGTTAGATATGATCCTCCCAAGTTATGGTATCAACGGTGACATTTCTAGTTTGCAACTACAAATTGAGGCTTACATCACAAGAGAGGAAGACCTTAAACAGAATAATAGTCCAATTCCCCTTCAATCCATATGGTTCAAGCCTAACCAAAAAGACTCYCCTATTTCTACTATTTTAGGTCCAAATAGTTGGGTTTGGCTTGGTGCTATAATATCATWTTCTTTCATAATCTTCATTATCCTAATTGGGATGATTAACCATTACTACATTTTCCCTGTTGATCATAACACCAATAAAATATTTTCATACCCTTTGAAGTCTTCTATCAACATGTTAGTGATATGTGTGTCAATAGCAATGGGTGCAAGTATAGCTGTTCTTTGGAACAAGAAACAAAATGCCAAAGAAGCAAAGAAGGTACAGAATATGGAGGGGTCATCTCCATCAGTAGGATCAACAAATTTCAAAGTTTGTGACATAGAAAGAGAATTGGAAAGCCTACCAAACCAAATCCTTGCCAATGCTACAAATGTGCATTATGCTGGAAGACCTGACCTAAGAAGATTACTGTTGGAACTGAAAGGGTCAAATGCTGGGGTTCTTGTTTCTGGACCCAAGGAAATGAGGCAGGAGGTAGCAGCTGTTTGCTCATCTAATTTGGCTGAAAATCTGCACTTTGAGTCCTTTAGCTTTAATTGGTGA 2178 0.3884 MNTNRRRRSEQVTNQEMDEEVLKKSPPSQEKYGRAQFAIRLMVLVLFLAWVFVWVVAPTDTYKQIWLPQLKAKINSSYFGKQGATLLLFTVPILFIAVLGSIYLHIAKKYNYFKIERSKNGKKCEGVFIGKRPMLVRGPLGIVSGTELALLFMFIVLLVWSFSNYLNNSFAKISQKSAAEDGEKVWQKKLDKSALMLGKVGNICLAMLFLPVTRGSSLLPLVGLKSESCIKYHIWLGNMLMTIFTAHGLCYIIYWAVTNQLSKMLEWKKTGISNVAGELTLLIGLLMWLTTFPRIRRKAFELFFYTHHLYILFIVLFIFHVGISYACIMLPGFYLFLVDRYLRFLQSRQRARLVSAGVLPWLTYNPTSIVFINIPSISKLQWHPFTVTSNSNLEPEILSVVIKSEGAWSQKLYQMLSVPSAIDHLNVHVEGPYGPVSTDYLRHETLVMISGGSGITPFVSIIRELIYLNITLRYRTPKLTLICAFKNTSCLSMLDMILPSYGINGDISSLQLQIEAYITREEDLKQNNSPIPLQSIWFKPNQKDSPISTILGPNSWVWLGAIISXSFIIFIILIGMINHYYIFPVDHNTNKIFSYPLKSSINMLVICVSIAMGASIAVLWNKKQNAKEAKKVQNMEGSSPSVGSTNFKVCDIERELESLPNQILANATNVHYAGRPDLRRLLLELKGSNAGVLVSGPKEMRQEVAAVCSSNLAENLHFESFSFNW* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2330 725 Gene3D - 427 555 IPR039261 -
Amo04g2330 725 PANTHER FERRIC REDUCTION OXIDASE 2 36 724 - -
Amo04g2330 725 CDD NOX_Duox_like_FAD_NADP 360 520 - -
Amo04g2330 725 Pfam Ferric reductase NAD binding domain 443 709 IPR013121 GO:0016491
Amo04g2330 725 MobiDBLite consensus disorder prediction 1 24 - -
Amo04g2330 725 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 331 439 IPR017927 GO:0016491
Amo04g2330 725 SFLD Ferric reductase subgroup (FRE) 21 725 - -
Amo04g2330 725 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 443 721 IPR039261 -
Amo04g2330 725 Pfam FAD-binding domain 362 436 IPR013112 GO:0016491
Amo04g2330 725 PANTHER NADPH OXIDASE 36 724 - -
Amo04g2330 725 SFLD Ferric Reductase Domain 58 725 - -
Amo04g2330 725 Pfam Ferric reductase like transmembrane component 198 317 IPR013130 -
Amo04g2330 725 Coils Coil 507 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2330 Amo-Chr4 95068307 95074583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2330 4 725 Miscellaneous Gene Families AT1G01580 53.108 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2330 K00521 - gmx:100814642 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3489 14 138182675 138189286 Amo04g2330 04 95068307 95074583 hybridization
Amo04g2330 04 95068307 95074583 Amo02g0394 02 4848781 4856534 PCT
Amo02g0394 02 4848781 4856534 Amo04g2330 04 95068307 95074583 PCT