Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2240 ATGTCTGTAATTCCGCCTTCTACTCCAAGGAGATTCGAAGCAACACATGTCGCTCCAAGGAAGCCTCAAGTTCTGCTTGCTGCTTGCGGATGTGTAGCTGCTGTAAAATTTGAAGTCCTTTGCAAATGTTTCTCACAGTGGGCGGAAGTAAGGGCAGTTGTCACGAAAGCCTCTCAGAAATTTGTTACTGAATTTCCCAAAGCTGTGCCTGTATATACTGATGAGTATGAATTGCTTAGTTGGAGAAGATTGGGTGATCCAGTTCTTCATATTGATCTTGCTAACTGGGCTGAAATCATGGTCATTGCCCCATTATCAGCAGACACTCTTGCTAAGATTGCTGGAGGGTTCAGTGACAATTTGCTCACATGTGTTGTAAGAGCTTGGGACTACAGCAAGCCACTCTTTGTTGCACCATCCATGGGAACTTCAACATGGAAAAACCCTTTCACTGATCAGCATCTCGCTGCCATTAATGACCTTGGAATGAATGTCATCCTCCCACAGAAGACAGCTTCGGGGCATACCACCGGAGCCATGGATGAGCCTGAAAGTATCTACTACAATGTGAGGTTCTACTATAATGCAAAGATGCAGAAGAAACCGGGGTAG 612 0.4526 MSVIPPSTPRRFEATHVAPRKPQVLLAACGCVAAVKFEVLCKCFSQWAEVRAVVTKASQKFVTEFPKAVPVYTDEYELLSWRRLGDPVLHIDLANWAEIMVIAPLSADTLAKIAGGFSDNLLTCVVRAWDYSKPLFVAPSMGTSTWKNPFTDQHLAAINDLGMNVILPQKTASGHTTGAMDEPESIYYNVRFYYNAKMQKKPG* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2240 203 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 17 196 - -
Amo04g2240 203 Gene3D - 10 201 IPR036551 GO:0003824
Amo04g2240 203 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 20 188 IPR036551 GO:0003824
Amo04g2240 203 PANTHER BNAA01G27100D PROTEIN 17 196 - -
Amo04g2240 203 Pfam Flavoprotein 23 187 IPR003382 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2240 Amo-Chr4 93510917 93511875 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2240 K01598 - gmx:100782568 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo04g2240 04 93510917 93511875 Amo12g2868 12 114939198 114946182 PCT