Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1919 ATGGCTATGTATCTGGATAACCCTAATATGCCACCATCCGTTAGCTCTACCGGCGCCACCGTCTACGCCGTTATTGGACCCCAATTTTGTGCTCCACATGCAGTGGATCTAACCCTGGTGAAGAACGTAGTGAAATTAAGCGACACTTGCTTTGATGTCACCGATGTCAATAACAACCTCGTTTTCAAAGTCAAGTCCAATGTTGTGTCCCTTCATGACCGCATTGTCATCAAAGATCCTCAGGGTAACACCATCATCACACTCCGACACAAGACGATGACTCTACATGATCGATGGCAATGTTTTAGGGGTGACAGCGTGAAAGACAAAGATCTGATATTCAACGTAAGACGAACCTTCTTTGTCCAACATGTTGCCAAATTGGATGTGTTCTTAGCCAGTAACACCGACGAAAAAGTTTGTGATTACAAGGTTAAAGGTAGCTTTCTTGAACGATCAGCCACAATTTATGTTGGTGAGACCGACATTATTACCGCCGCGATGAAAAAACATCACACTGCTGGGAGTATTCTCATTGGAAAAGACAATTTCACAATCTCTGTGAGCCAAAACTTTGATTATGGGTTTGCTGTGGCGATAATTATGATTCTTTATGAGCTCAACCATGACGATTAG 636 0.4308 MAMYLDNPNMPPSVSSTGATVYAVIGPQFCAPHAVDLTLVKNVVKLSDTCFDVTDVNNNLVFKVKSNVVSLHDRIVIKDPQGNTIITLRHKTMTLHDRWQCFRGDSVKDKDLIFNVRRTFFVQHVAKLDVFLASNTDEKVCDYKVKGSFLERSATIYVGETDIITAAMKKHHTAGSILIGKDNFTISVSQNFDYGFAVAIIMILYELNHDD* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1919 211 PANTHER PROTEIN LURP-ONE-RELATED 1-RELATED 14 211 - -
Amo04g1919 211 PANTHER - 14 211 IPR007612 -
Amo04g1919 211 SUPERFAMILY Tubby C-terminal domain-like 23 207 IPR025659 -
Amo04g1919 211 Gene3D - 22 211 IPR038595 -
Amo04g1919 211 Pfam LURP-one-related 24 203 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1919 Amo-Chr4 87253503 87256397 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1919 - - gmx:100795989 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2962 14 125921166 125923354 Amo04g1919 04 87253503 87256397 hybridization
Amo04g1919 04 87253503 87256397 Amo02g2665 02 83282365 83283848 PCT
Amo02g2665 02 83282365 83283848 Amo04g1919 04 87253503 87256397 PCT