Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1800 ATGGTTGTTCCTCTAAAACTAGGAATAATGATCATTGTTATAGCACAAACCCTTTTGATTTTCATGGATGAATCTAGTGGTGTTAATTCATACCCTTGTGATTCACATGATGCCAATATTGTTGATGAGACTAATATTATGAAAGTTAATCTCTCAGTGTACTATGGAAGCCTTTGCCAGCCATGTTCAACTTTCATTATTAAGAATCTCCAGGAAATATTCTACAATGGTCTTATCAACATTATCAATCTCCAACTAGTTCCTTGGGCCAATGCTTATATCAACAATGACACTAATAATTCCATAATTTGCCAGAATGGCCCGGATGAATGTGAGCTTAATTCGGTGGAAAGCTGTGCCATCAACATTTTGAATGATGTGAACAAATACTATGCTTTGATTGAGTGCTTGGAGCTTCTAGCAATTGAAAAAAGGCAAAAGAATTGGGAGGAATGCTTCAACACATTAGGTTTGCCTAATGCTCCTATTGTCAAATGCCATAACACAGGAAATGGAACCGAGCTTGGACGAAAACATATTAATGAAACTGCACTTCTTCATTCACCTCACACATTGTTGCCAGTGGTGGTGGTAAACAATAATTCAATTGGAAAGGAATATGAAAATTTCACAAGCTACGTTTGTAATTCTTATAGAGGCTCTTCTATGCCAGAAGCATGCAAACTTCATTAG 693 0.3651 MVVPLKLGIMIIVIAQTLLIFMDESSGVNSYPCDSHDANIVDETNIMKVNLSVYYGSLCQPCSTFIIKNLQEIFYNGLINIINLQLVPWANAYINNDTNNSIICQNGPDECELNSVESCAINILNDVNKYYALIECLELLAIEKRQKNWEECFNTLGLPNAPIVKCHNTGNGTELGRKHINETALLHSPHTLLPVVVVNNNSIGKEYENFTSYVCNSYRGSSMPEACKLH* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1800 230 Pfam Gamma interferon inducible lysosomal thiol reductase (GILT) 51 155 IPR004911 GO:0016671
Amo04g1800 230 PANTHER GAMMA INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE 10 228 - -
Amo04g1800 230 PANTHER GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT 10 228 IPR004911 GO:0016671
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1800 Amo-Chr4 84225574 84228448 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1800 K08059 - gmx:100306044 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2813 14 121333882 121336749 Amo04g1800 04 84225574 84228448 hybridization
Amo04g1800 04 84225574 84228448 Amo02g2576 02 81737917 81740850 PCT
Amo02g2576 02 81737917 81740850 Amo04g1800 04 84225574 84228448 PCT