Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1347 ATGGCCTCATTTTCCACTTCTCACTGCATCATTGCCTTCACATTCCTCAACTTGTTCCTCAAAATCCAAGCTTTGAACCCAGTTCCATCTTTTTCGTTCACAGACTTGGGAAAAGATCCAATTTTCAAGCAAAGTGTAGCACTTTATGGTAATGCAAGGGTTGTCAATGGCGAGTCTGAGGTTATGCTCTCTGGGTCTGGCAAAGTGATGAGAAAGAACCCCATCAAGCTTGTTGATGCTGCATCAAAGGGTTTGGTCTCATTTTCAACCTACTTTGCTTTTTCAATTTCCTTCAATGARGGTGGGGATGGCTTGGCTTTTGTTATGGTTCCAAGTGGTTCTGAAGGTGAGTTTTTTGGTAATAACTCATCAGGGTTCTCTCTTGGATTGAAAGGAAAAAGCGGATTYGATGTTGTTGGTATTGAGTTTAGTATTGCAAATAGGGGTTCTGCTAGTTTTAATGTGGCCATTAAGGTTGGTGATTCAGTTCCTGCTAAAAAAAGCAATGTTTCTTCTGTTGTAAGAAGTGGTGAAAAAATGCATGCTTGGATTGATTATGTTGCAAGTTCTAGGAGATTAGAAGTTAGATTGAATCAATTTGGTCATTCAAGGCCATATGATCCAATTATATGGCATTCAATTGATTTCCCAAGTGTTTGGGAGTCCAAAGAAATGTTTGTGGGATTTAGTCCAGTGAAAAAGCATGATAATATTAATAGCTCTCAAGCATGCTTTCTCTATTCGTGGAGCTTTGTTTTGAGGATTTTCCCGCATTGGATGCACTCCGAGCCGGTTGATCCGAAGGTCCTTGCTACCAAGGAAACTGAGGCTCCAGTGGTGAAACCAAAGAGTGACTGCCTTTTGAGAATTCTTGCTGCTATGATATTCGGTGCCGGATGTGGAGCTTTGACAGCATTTGTTGTGCTTTATGTGTGGACCATCTTCGGCAATAGACGTCCGGTGATGCCGGAGGAGTATGTTATGCAGCCAATGGATTTCGAGTACAAGAAAGTCGACGTTGTTGTAGATAAACCCATCAAAGGTGCTAAGGAGTAG 1056 0.4157 MASFSTSHCIIAFTFLNLFLKIQALNPVPSFSFTDLGKDPIFKQSVALYGNARVVNGESEVMLSGSGKVMRKNPIKLVDAASKGLVSFSTYFAFSISFNEGGDGLAFVMVPSGSEGEFFGNNSSGFSLGLKGKSGFDVVGIEFSIANRGSASFNVAIKVGDSVPAKKSNVSSVVRSGEKMHAWIDYVASSRRLEVRLNQFGHSRPYDPIIWHSIDFPSVWESKEMFVGFSPVKKHDNINSSQACFLYSWSFVLRIFPHWMHSEPVDPKVLATKETEAPVVKPKSDCLLRILAAMIFGAGCGALTAFVVLYVWTIFGNRRPVMPEEYVMQPMDFEYKKVDVVVDKPIKGAKE* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1347 351 Pfam Legume lectin domain 30 253 IPR001220 GO:0030246
Amo04g1347 351 Gene3D - 29 255 - -
Amo04g1347 351 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 258 IPR013320 -
Amo04g1347 351 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 1 349 - -
Amo04g1347 351 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 1 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1347 Amo-Chr4 64717300 64718916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1347 50 230 Receptor kinase-like Gene Family AT5G03140 31.282 5.45e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1347 - - gmx:100800406 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo04g1347 04 64717300 64718916 Amo02g2391 02 76552192 76553522 PCT
Amo02g2391 02 76552192 76553522 Amo04g1347 04 64717300 64718916 PCT